G231288


Basic Information

Item Value
gene id G231288
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18548528 ~ 18548758 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264469
attttgggatattgtgtgtagatggatgagaaaacTAAATATTGAATCCGTTTTGAATTcacgctgtaacacaacaaaatgttgaataactcaagcagtatgaatactttctgatggcactgtacATCAACATGACCTTCAACAACTTCTGCATTTTTGCATCGCAACACCCTTCCACAGGTGCACTATGTGAGGCATGGTACAGCAGTGTTGTTAAGCCATGGAAATCCC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264469 True 231 lncRNA 0.45 1 18548528 18548758

Neighbor

gene id symbol gene type direction distance location
LOC110511603 LOC106579246 coding upstream 161709 18359078 ~ 18386819 (+)
LOC110511644 hint3 coding upstream 195209 18349625 ~ 18353319 (+)
LOC110511665 LOC106579269 coding upstream 199683 18343327 ~ 18348845 (+)
LOC110511763 LOC106605526 coding upstream 317891 18219599 ~ 18230637 (+)
LOC110511795 rwdd1 coding upstream 350849 18188613 ~ 18197679 (+)
LOC110511593 LOC106579240 coding downstream 20940 18569698 ~ 18588248 (+)
LOC110511568 rn146 coding downstream 39941 18588699 ~ 18601905 (+)
LOC110511366 LOC106605529 coding downstream 139007 18687765 ~ 18692685 (+)
LOC110511341 LOC106579140 coding downstream 162878 18711636 ~ 18720405 (+)
LOC110511301 LOC106579115 coding downstream 172153 18720911 ~ 18793719 (+)
G231279 NA non-coding upstream 10699 18537630 ~ 18537829 (+)
G231277 NA non-coding upstream 19163 18529063 ~ 18529365 (+)
G230997 NA non-coding upstream 242814 18305474 ~ 18305714 (+)
G230912 NA non-coding upstream 243468 18298318 ~ 18305060 (+)
G230995 NA non-coding upstream 250282 18297322 ~ 18298246 (+)
G231363 NA non-coding downstream 132948 18681706 ~ 18682023 (+)
G231366 NA non-coding downstream 147145 18695903 ~ 18696158 (+)
G231367 NA non-coding downstream 148580 18697338 ~ 18698907 (+)
G230916 NA other upstream 252423 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 1749596 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 1900944 16619192 ~ 16674738 (+)
LOC118944532 NA other upstream 2032635 16477925 ~ 16515897 (+)
zgc:162160 LOC106605640 other upstream 2851884 15672260 ~ 15697397 (+)
G231438 NA other downstream 302491 18851249 ~ 18851982 (+)
G231983 LOC106597055 other downstream 677608 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 1278372 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 2010018 20558776 ~ 20565712 (+)

Expression


Co-expression Network