G231757


Basic Information

Item Value
gene id G231757
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18817540 ~ 18818396 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265001
TTTCTTACTGTCAGTGTGTCATATGCTGGAAAGGGGTCTATCGGTCTACAATGTTACACTACGGAGGAAGTTACCAAACCGGTTCGCAGTCAGGACTCTTTGCCAGACATAGGAAATAACGCTGTTATGGATTGTGTTACATACCGGTATTTTGCCTTGGGGTGATTATGTAGATAAATTGGATTGTGAGGATATCAATacaaacatgtattttatttcTGAGGGCATCCTAGTTTATGTTGGGGAGCCTTATTAAATATTGCATAACGTTTTTTTGAAAGTCTTTTTTTGCCAAGACCCCTACTAGGACATTTTTAATGTTACTCTAACATTAGAAGCTAAGTAgcaacactatatatatatatttatgttaaTAACTATAATAGTAATGCTAAGCACTGACACAATAGGGTTTGCTTCTTTGTATTCAACTCCAGTATGAAAAACTCTACCAATCGATCAGTGATCAATTAATTAATTCCTTCATTAATTCAATATTTGAAATGCCATATAATTTATTCTCCATTAAATTCATATTTCTGGTTTTTACCATTGATGGCCTCACAATCGAATCATGTCAACATTACAGGAGTGTGCATTAAAATAGTCCACATTCACAAGACTCATCCACTGATTAATTATTTATACTATAACTGTAATAGTAGTTAGTCACATGAAACTATAACACTGTGTATGAATACGATTATGAAAGGTCTGGATGGACACTATAACTCTCAGGACAAGGGGTGTCATGGTCAAACAAGACTTCACCACATGTCTTCACAGGTAGTGGTTAAAGACTGTTTCAAATTTCTCCTGATGTGACTTTGGGCTGCTCATTTTGCTTGACAAAGTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265001 True 857 lncRNA 0.35 1 18817540 18818396

Neighbor

gene id symbol gene type direction distance location
LOC110511312 LOC106605543 coding downstream 20171 18793985 ~ 18797369 (-)
LOC110511352 LOC106605528 coding downstream 111066 18697337 ~ 18706474 (-)
LOC110511375 NA coding downstream 140900 18633399 ~ 18676640 (-)
LOC110511506 lyric coding downstream 184293 18624581 ~ 18633247 (-)
laptm4b LOC106605533 coding downstream 193113 18612092 ~ 18624427 (-)
LOC110511207 oxr1 coding upstream 8483 18826879 ~ 19024152 (-)
LOC110511176 LOC106579058 coding upstream 247116 19065512 ~ 19282368 (-)
rims2a LOC106579570 coding upstream 597658 19416054 ~ 19652601 (-)
LOC110512409 LOC106605396 coding upstream 836887 19655283 ~ 19667465 (-)
LOC110512480 flot1 coding upstream 943980 19762376 ~ 19785561 (-)
G231756 NA non-coding downstream 123 18817043 ~ 18817417 (-)
G231755 NA non-coding downstream 670 18816371 ~ 18816870 (-)
G231753 NA non-coding downstream 2497 18814811 ~ 18815043 (-)
G231686 NA non-coding downstream 107245 18710092 ~ 18710295 (-)
G231679 NA non-coding downstream 132822 18684112 ~ 18684718 (-)
G231771 NA non-coding upstream 46825 18865221 ~ 18866306 (-)
G231886 NA non-coding upstream 211039 19029435 ~ 19029893 (-)
G231893 NA non-coding upstream 216557 19034953 ~ 19035251 (-)
G232059 NA non-coding upstream 297694 19116090 ~ 19116568 (-)
G232062 NA non-coding upstream 303348 19121744 ~ 19121944 (-)
G231652 rn146 other downstream 215665 18599730 ~ 18601875 (-)
LOC110503747 lars2 other downstream 686486 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 839631 17975160 ~ 17985544 (-)
G229707 NA other downstream 1769196 17043792 ~ 17048344 (-)
G229380 LOC106605502 other downstream 1967341 16849972 ~ 16850199 (-)
G232980 NA other upstream 829690 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 937808 19756204 ~ 19757908 (-)
G233513 LOC106561082 other upstream 1733387 20551783 ~ 20551997 (-)

Expression


Co-expression Network