G231460


Basic Information

Item Value
gene id G231460
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 18888377 ~ 18889148 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU264653
TCATTGTACTTATTATAGTTGCCATATACTGAGGTGTTCTAGTAGGAGAGTTGATATACTGAGGTATTCTAGTAGAGTTCATATACTGAGGTATTGTAGTAGGAGAGTTGATACACTGAGGTATTCTAGTAGGAGAGTTGATATACTGAGGTGTTCTAGTAGGAGAGTTGATATACTGAGGTATTCTAGTAGAGTTCATATACTGAGGTATTGTAGTAGAGTTGATATACTGAGGTagtctgtcccagctttgatgcgcctgtactgacctctctttcttgatgatagcggggtgaacaggcagtggctcgggtggttgatgtccttgatgatcttttcggccttcctatgacattgggtgctgtag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU264653 True 367 lncRNA 0.42 2 18888377 18889148

Neighbor

gene id symbol gene type direction distance location
LOC110511248 LOC106579093 coding upstream 61655 18819001 ~ 18826722 (+)
LOC110511268 LOC106605544 coding upstream 75331 18801968 ~ 18813046 (+)
LOC110511301 LOC106579115 coding upstream 94658 18720911 ~ 18793719 (+)
LOC110511341 LOC106579140 coding upstream 167972 18711636 ~ 18720405 (+)
LOC110511366 LOC106605529 coding upstream 195692 18687765 ~ 18692685 (+)
LOC110511188 LOC106605483 coding downstream 155159 19044307 ~ 19066203 (+)
LOC110512399 dpys coding downstream 467624 19356772 ~ 19408498 (+)
LOC110512421 LOC106579530 coding downstream 778450 19667598 ~ 19674027 (+)
LOC110512436 LOC106579516 coding downstream 785016 19674164 ~ 19682731 (+)
LOC110503829 LOC106605397 coding downstream 805975 19695123 ~ 19762329 (+)
G231454 NA non-coding upstream 15704 18872406 ~ 18872673 (+)
G231449 NA non-coding upstream 22912 18864777 ~ 18865465 (+)
G231419 NA non-coding upstream 72087 18815565 ~ 18816290 (+)
G231367 NA non-coding upstream 189470 18697338 ~ 18698907 (+)
G231464 NA non-coding downstream 3528 18892676 ~ 18893090 (+)
G231550 NA non-coding downstream 130665 19019813 ~ 19021640 (+)
G231890 NA non-coding downstream 144676 19033824 ~ 19034146 (+)
G231906 NA non-coding downstream 154136 19043284 ~ 19043498 (+)
G231936 NA non-coding downstream 214688 19103836 ~ 19104046 (+)
G231438 NA other upstream 36395 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 301536 18569698 ~ 18588248 (+)
G230916 NA other upstream 592272 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 2089445 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 2240793 16619192 ~ 16674738 (+)
G231983 LOC106597055 other downstream 337218 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 937982 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 1669628 20558776 ~ 20565712 (+)
G233545 NA other downstream 1719145 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 2374927 21264075 ~ 21264506 (+)

Expression


Co-expression Network