G231947


Basic Information

Item Value
gene id G231947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19129706 ~ 19130051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265203
gtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtctgacagagagagtgtgtttgacagagagagtgtgtctgacagagagagtgtgtttgacagagagagtgtgtttgacagatagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagagagtgtgtttgacagagagtgtgtgtttgacagagagagtgtgtttgacagagagtgtgtttgacagagtGTGATCGGCCTCCA

Function

NR:

description
PREDICTED: uncharacterized protein LOC106904876

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265203 True 346 lncRNA 0.41 1 19129706 19130051

Neighbor

gene id symbol gene type direction distance location
LOC110511188 LOC106605483 coding upstream 63503 19044307 ~ 19066203 (+)
LOC110511248 LOC106579093 coding upstream 302984 18819001 ~ 18826722 (+)
LOC110511268 LOC106605544 coding upstream 316660 18801968 ~ 18813046 (+)
LOC110511301 LOC106579115 coding upstream 335987 18720911 ~ 18793719 (+)
LOC110511341 LOC106579140 coding upstream 409301 18711636 ~ 18720405 (+)
LOC110512399 dpys coding downstream 226721 19356772 ~ 19408498 (+)
LOC110512421 LOC106579530 coding downstream 537547 19667598 ~ 19674027 (+)
LOC110512436 LOC106579516 coding downstream 544113 19674164 ~ 19682731 (+)
LOC110503829 LOC106605397 coding downstream 565072 19695123 ~ 19762329 (+)
LOC110503837 LOC106605407 coding downstream 671188 19801239 ~ 19801909 (+)
G231946 NA non-coding upstream 2626 19126744 ~ 19127080 (+)
G231944 NA non-coding upstream 7282 19122211 ~ 19122424 (+)
G231936 NA non-coding upstream 25660 19103836 ~ 19104046 (+)
G231906 NA non-coding upstream 86208 19043284 ~ 19043498 (+)
G231890 NA non-coding upstream 95560 19033824 ~ 19034146 (+)
G231949 NA non-coding downstream 4112 19134163 ~ 19134805 (+)
G231978 NA non-coding downstream 78395 19208446 ~ 19214698 (+)
G231979 NA non-coding downstream 85368 19215419 ~ 19220631 (+)
G231980 NA non-coding downstream 88201 19218252 ~ 19218483 (+)
G231987 NA non-coding downstream 105842 19235893 ~ 19243850 (+)
G231438 NA other upstream 277724 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 542865 18569698 ~ 18588248 (+)
G230916 NA other upstream 833601 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 2330774 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 2482122 16619192 ~ 16674738 (+)
G231983 LOC106597055 other downstream 96315 19226366 ~ 19234295 (+)
LOC110512505 LOC106579702 other downstream 697079 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 1428725 20558776 ~ 20565712 (+)
G233545 NA other downstream 1478242 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 2134024 21264075 ~ 21264506 (+)

Expression


Co-expression Network