Gene
RNA
| Item | Value |
|---|---|
| gene id | G231949 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 19134163 ~ 19134805 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106534789 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU265205 | True | 263 | lncRNA | 0.42 | 2 | 19134163 | 19134805 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110511188 | LOC106605483 | coding | upstream | 67960 | 19044307 ~ 19066203 (+) |
| LOC110511248 | LOC106579093 | coding | upstream | 307441 | 18819001 ~ 18826722 (+) |
| LOC110511268 | LOC106605544 | coding | upstream | 321117 | 18801968 ~ 18813046 (+) |
| LOC110511301 | LOC106579115 | coding | upstream | 340444 | 18720911 ~ 18793719 (+) |
| LOC110511341 | LOC106579140 | coding | upstream | 413758 | 18711636 ~ 18720405 (+) |
| LOC110512399 | dpys | coding | downstream | 221967 | 19356772 ~ 19408498 (+) |
| LOC110512421 | LOC106579530 | coding | downstream | 532793 | 19667598 ~ 19674027 (+) |
| LOC110512436 | LOC106579516 | coding | downstream | 539359 | 19674164 ~ 19682731 (+) |
| LOC110503829 | LOC106605397 | coding | downstream | 560318 | 19695123 ~ 19762329 (+) |
| LOC110503837 | LOC106605407 | coding | downstream | 666434 | 19801239 ~ 19801909 (+) |
| G231947 | NA | non-coding | upstream | 4112 | 19129706 ~ 19130051 (+) |
| G231946 | NA | non-coding | upstream | 7083 | 19126744 ~ 19127080 (+) |
| G231944 | NA | non-coding | upstream | 11739 | 19122211 ~ 19122424 (+) |
| G231936 | NA | non-coding | upstream | 30117 | 19103836 ~ 19104046 (+) |
| G231906 | NA | non-coding | upstream | 90665 | 19043284 ~ 19043498 (+) |
| G231978 | NA | non-coding | downstream | 73641 | 19208446 ~ 19214698 (+) |
| G231979 | NA | non-coding | downstream | 80614 | 19215419 ~ 19220631 (+) |
| G231980 | NA | non-coding | downstream | 83447 | 19218252 ~ 19218483 (+) |
| G231987 | NA | non-coding | downstream | 101088 | 19235893 ~ 19243850 (+) |
| G231996 | NA | non-coding | downstream | 115788 | 19250593 ~ 19251036 (+) |
| G231438 | NA | other | upstream | 282181 | 18851249 ~ 18851982 (+) |
| LOC110511593 | LOC106579240 | other | upstream | 547322 | 18569698 ~ 18588248 (+) |
| G230916 | NA | other | upstream | 838058 | 18295354 ~ 18296105 (+) |
| LOC100653482 | mrap2 | other | upstream | 2335231 | 16794699 ~ 16801793 (+) |
| LOC110503770 | LOC106605493 | other | upstream | 2486579 | 16619192 ~ 16674738 (+) |
| G231983 | LOC106597055 | other | downstream | 91561 | 19226366 ~ 19234295 (+) |
| LOC110512505 | LOC106579702 | other | downstream | 692325 | 19821356 ~ 19844652 (+) |
| G233521 | LOC106579937 | other | downstream | 1423971 | 20558776 ~ 20565712 (+) |
| G233545 | NA | other | downstream | 1473488 | 20608293 ~ 20608725 (+) |
| G234322 | dcst2 | other | downstream | 2129270 | 21264075 ~ 21264506 (+) |
