G231983 (LOC106597055)


Basic Information

Item Value
gene id G231983
gene name LOC106597055
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19226366 ~ 19234295 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265246
tcccagtctgctccacccagacaatcacccacaactgcaattctaattgattcaaatgggaagttcttagtccaggaaagattattccctagacaccaggtgtataagttctggtgtcctacaactgagagtgcaatgcagctactcagtcagaccaggattgacacccctgacaacatcatcatccacactggcacaaacgaccttcatgccaaaggtgaaaatgtatctggggcagtgagaagagtggcagaacgggcacaggctatgttcccaacaaccaatatagttatgtccaccctcctaccaagaaaagacttcccagaaaagttgatcgacaaaataaatcaacagatcactgtggactgtgcctcactgctcaacgtcagaacggctcaccaccccactctgacatgtcaacacttatatgataatatacatcttgatcaggacagtatcagaacctttgccaaggacctaaaagatgcaacacttggcagggacccacacacccatcaccccagca

Function

NR:

description
PREDICTED: uncharacterized protein LOC106597055, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265246 True 526 TUCP 0.47 2 19226366 19234295

Neighbor

gene id symbol gene type direction distance location
LOC110511188 LOC106605483 coding upstream 160163 19044307 ~ 19066203 (+)
LOC110511248 LOC106579093 coding upstream 399644 18819001 ~ 18826722 (+)
LOC110511268 LOC106605544 coding upstream 413320 18801968 ~ 18813046 (+)
LOC110511301 LOC106579115 coding upstream 432647 18720911 ~ 18793719 (+)
LOC110511341 LOC106579140 coding upstream 505961 18711636 ~ 18720405 (+)
LOC110512399 dpys coding downstream 122477 19356772 ~ 19408498 (+)
LOC110512421 LOC106579530 coding downstream 433303 19667598 ~ 19674027 (+)
LOC110512436 LOC106579516 coding downstream 439869 19674164 ~ 19682731 (+)
LOC110503829 LOC106605397 coding downstream 460828 19695123 ~ 19762329 (+)
LOC110503837 LOC106605407 coding downstream 566944 19801239 ~ 19801909 (+)
G231979 NA non-coding upstream 5735 19215419 ~ 19220631 (+)
G231980 NA non-coding upstream 7883 19218252 ~ 19218483 (+)
G231978 NA non-coding upstream 11668 19208446 ~ 19214698 (+)
G231949 NA non-coding upstream 91561 19134163 ~ 19134805 (+)
G231947 NA non-coding upstream 96315 19129706 ~ 19130051 (+)
G231987 NA non-coding downstream 1598 19235893 ~ 19243850 (+)
G231996 NA non-coding downstream 16298 19250593 ~ 19251036 (+)
G232148 NA non-coding downstream 57305 19291600 ~ 19294496 (+)
G232205 NA non-coding downstream 157507 19391802 ~ 19395926 (+)
G232215 NA non-coding downstream 179682 19413977 ~ 19418583 (+)
G231438 NA other upstream 374384 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 639525 18569698 ~ 18588248 (+)
G230916 NA other upstream 930261 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 2427434 16794699 ~ 16801793 (+)
LOC110503770 LOC106605493 other upstream 2578782 16619192 ~ 16674738 (+)
LOC110512505 LOC106579702 other downstream 592835 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 1324481 20558776 ~ 20565712 (+)
G233545 NA other downstream 1373998 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 2029780 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 2052431 21286726 ~ 21287002 (+)

Expression


Co-expression Network