G231987


Basic Information

Item Value
gene id G231987
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19235893 ~ 19243850 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265250
atacatatgtgcagcttatgctcctccttcagattcatcatattatgatgatcagttttttgacaatctccagacagaaatcattacatttcaggcgcagggtaaagtgcttctttgtggagatttcaatgcaagaacaggttctgagcctgactacactgatgcgggaggtaaccaccacatatttggacacccctccttgtacagtagccctattataaataatagaaacagtcctgaccaaatactgaacaaaaatggaaaagagttagtacatctctgtcgagccttaggcctgtacatgcttaatggtagaatcagaggggactctttaggtcagtttacttactgctcagctcttgggacaagtgtagtcgattatgccatcactgacattgacccctcctccattag

Function

NR:

description
PREDICTED: uncharacterized protein LOC109105496

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265250 True 414 lncRNA 0.42 2 19235893 19243850

Neighbor

gene id symbol gene type direction distance location
LOC110511188 LOC106605483 coding upstream 169690 19044307 ~ 19066203 (+)
LOC110511248 LOC106579093 coding upstream 409171 18819001 ~ 18826722 (+)
LOC110511268 LOC106605544 coding upstream 422847 18801968 ~ 18813046 (+)
LOC110511301 LOC106579115 coding upstream 442174 18720911 ~ 18793719 (+)
LOC110511341 LOC106579140 coding upstream 515488 18711636 ~ 18720405 (+)
LOC110512399 dpys coding downstream 112922 19356772 ~ 19408498 (+)
LOC110512421 LOC106579530 coding downstream 423748 19667598 ~ 19674027 (+)
LOC110512436 LOC106579516 coding downstream 430314 19674164 ~ 19682731 (+)
LOC110503829 LOC106605397 coding downstream 451273 19695123 ~ 19762329 (+)
LOC110503837 LOC106605407 coding downstream 557389 19801239 ~ 19801909 (+)
G231979 NA non-coding upstream 15262 19215419 ~ 19220631 (+)
G231980 NA non-coding upstream 17410 19218252 ~ 19218483 (+)
G231978 NA non-coding upstream 21195 19208446 ~ 19214698 (+)
G231949 NA non-coding upstream 101088 19134163 ~ 19134805 (+)
G231947 NA non-coding upstream 105842 19129706 ~ 19130051 (+)
G231996 NA non-coding downstream 6743 19250593 ~ 19251036 (+)
G232148 NA non-coding downstream 47750 19291600 ~ 19294496 (+)
G232205 NA non-coding downstream 147952 19391802 ~ 19395926 (+)
G232215 NA non-coding downstream 170127 19413977 ~ 19418583 (+)
G232297 NA non-coding downstream 317359 19561209 ~ 19561545 (+)
G231983 LOC106597055 other upstream 1598 19226366 ~ 19234295 (+)
G231438 NA other upstream 383911 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 649052 18569698 ~ 18588248 (+)
G230916 NA other upstream 939788 18295354 ~ 18296105 (+)
LOC100653482 mrap2 other upstream 2436961 16794699 ~ 16801793 (+)
LOC110512505 LOC106579702 other downstream 583280 19821356 ~ 19844652 (+)
G233521 LOC106579937 other downstream 1314926 20558776 ~ 20565712 (+)
G233545 NA other downstream 1364443 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 2020225 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 2042876 21286726 ~ 21287002 (+)

Expression


Co-expression Network