G232802


Basic Information

Item Value
gene id G232802
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19404919 ~ 19408499 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266156
ATCTGTTTCAGTTGTTTAATGTCGATCAAAAACGACAGGGACAGTTTTGCTGACATCATCACGCAAACCAGACCTTCCCTAAATGTGCACGCCACTATTCAGTTCCCATCATGCACTTGGTGTTTAGTCACACCCCATTAGCATTATATCCAGACGCCACAATGCGCATCTACCACGGTGATTGTAGTGGGTCCTGACAGTGACACATCCCCCTTCACAGAATGCTGACAGTCAGTCAGGAGACGTACCCCTCTAAGCTTCCGTAACgttgaaatatgacatttaccaGATTATTTTGTCTCAAGGTATTTACAGTGGGGTTCAAAATTATGACtgcataaaataaataattaaaatactgaGCTACATTCTATACTCCAAaaaattgggaaattatattatttatactaatacaattgctgaGAGAACAATtgtgtttaacaagtaatataatTTTTTTCTCAAAGAGTTAGGGGTAAAAAATATTGACACCCCTGTTAACAATACCTTTCAATATCTCACCTTGCAagaattgtcacgccctgaccttagagagcctttttatgtctctatttggtttggtcagggtgtgatttgggtgggcattctatgttccttatTTCTCgtttttgtgtttctatgttttggccgggtatggttatcaatcagggacagctgtctatcgttgtctctgattgggaatcatacttaggcagcctgttttgccaccttaggttGTGTGATGTTGGTTTTTGTTAGCTCTGTGTAGCCTTCAGAACGTGACGgtcgttgttgtttttgttggtgTTCGGATGAATTaaagaatcatgaacacgtaccacgctgcaccttggtccacttcttccgaCGAGCGTTACAATAAtaatggcactgagcctttttccaaattgttttatgagttggagaacacatcgAGAGGGATCTTAAACCATTTCTCAATACAGAATACTTCCAGATACTTGATATCCTAAGTCTGCTCCTATGGACTGCACTAATAATTTCAAACCACatgttttcaatgggtttcaagtccGGAAACTGAGTTGgcaattgcaaaatgttgatttttgtgGCAAATTCTTCTTTCGACGCGAAACCCACAACTGGCGTGCccggccaaagagctctattttttttgtcatctgaccaaagcactgGTTCCAATCCAATTGCCAATGCcattttagcaaactccaggcatttacatttgttggatgacatgaaaatagagctaaTAAATGAGAATGCATAAGCAGAAAAGCACCCCATACccactgtaaaatatggtgatagatctttgatgttatggggctattttgcctCAACTGGTCcaggggcccttgttaaggtcaatgcCATCATGATCCTTACCCAGTACAAGGACATTTTAGCCTAAAACCTTGTTGCCTCTgacaggaggctgaaacttgacCTCAAGTGGATCGtttagcaagacaataacccaaaGCActcatcaaaatccacaaagaaatagtTAATTGTCTACAAAAATCGACATTTTGCAATGGCAATCTCAGACATGAACCCCATCTGAAAacgtggtttgaattgaagagggcagttcaTAAGCGCAGTGTAACGgtcgtcgtcggtggaagaaggtgaggaccaaagcgcagcgtggtaagtgttcatgttttttaataaagtaacgaacactgaacaaaacaataaacgtgaagttatcaaaccgaaacagtcccgtgtggcaccaACACTAACACGGAAAAAGTGTAACCAAGCTCCCTAAGTATGACTCTCAATCtgggacaatgattgacagctgcctctgattgagaaccataccaggccgaacacagCAATCCTAAAtcaatagaaaaaagaacatagacaacccacccaactcacgccctgaccattctaaaacaaagacataatataagaactaaggtcagaacgtgacacgcagactaaggatatcaaggatctgaaaGGATTCTGTATGCAGGAAGTGTCTAAGATcgctcccaatgtgttctccaactcattaAATATTTTAGAAAAAAGCTCAGTGCCGTTATCCTGGCAAGGTGAgatattgaaaggtattgaaaaccggggtgtcaatcatttttacCCTTACCTTTTCTCTTCAGCAagtgtattagtataaaataatagaatttttttttaaattggggaGCACAGTATATGAATGATTTAAttatttttgctcatctttatcaagggctTCAATAATgtcagaccccactgtatatgaagATAAAGGATCATGTGAAAAATGTTGCCTAATAGCACAATTGTACATGTCATTGCTCAATTGTGCCAGGCAGGTCAACTCAGTAAAGTGCAGTGTAAGTGTTTGAAAGAAAATGTATACTATTTTAACCCAGGTCTGTTACTGAGAGAAGGCACAGTGAAAGAAAAGGCAGAGTGAAGGAGAAggcagagtgaaggaggagaaggCAGAGTGAAGGGGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGACAGAGAAGGCAGAGTGACAGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAgagaaggcagagggaaggagaaggcacagtgaaagagaaggcacagtgaaggagaaggcacagtgaaagaggagacagagtgaAGGAGAAGGCACAGAGATGAGTGGGCCGACTGTGACTCACACACTGCTGCCACTGACCCCTAGCGTTCCCTCTGATAAACTCACATTATGTCTGCAGAGCCCCAGTGGCTCAGTACCACGCCAGCATGCCAGAATGCCCAGTAGGAGACAATCCCAATGTGTAATGTGATGCTGTGTGACAACAGCACTGGGCCTTTTTTACAAAGGCCAAGCACATTGCAGCACTGCGCGCTGAACTACACACAATTTTCCCCAGAGTTTGTGAAGCTCATGTTCATGGTAAACGCTGTGGATGTCAGCTCAAGTGGATATGAGCTTTCAATGTGAAACACTGTGCGCTTCATACTTTAACACGGAAGTAAGGGTAGACAAAATAGTTTGGCAACATAATATCATCAGCATCAAAACATTGACTGGCATCTGCATTCAAACAAACATGCATTTTATCATGGTCCAGCATAACACAATTCACCGAACGTTTTGCATGTAGATCCTGAGCTAAACAGTCTCTTGCATGATGAGATCCATTCCTTTATATGGCGATGATTTCACCATCATAGGGCTTCCTGATTACAGGACTAGGCTGTCCC
>TU266157
ATCTGTTTCAGTTGTTTAATGTCGATCAAAAACGACAGGGACAGTTTTGCTGACATCATCACGCAAACCAGACCTTCCCTAAATGTGCACGCCACTATTCAGTTCCCATCATGCACTTGGTGTTTAGTCACACCCCATTAGCATTATATCCAGACGCCACAATGCGCATCTACCACGGTGATTGTAGTGGGTCCTGACAGTGACACATCCCCCTTCACAGAATGCTGACAGTCAGTCAGGAGACGTACCCCTCTAAGCTTCCGTAACgttgaaatatgacatttaccaGATTATTTTGTCTCAAGGTATTTACAGTGGGGTTCAAAATTATGACtgcataaaataaataattaaaatactgaGCTACATTCTATACTCCAAaaaattgggaaattatattatttatactaatacaattgctgaGAGAACAATtgtgtttaacaagtaatataatTTTTTTCTCAAAGAGTTAGGGGTAAAAAATATTGACACCCCTGTTAACAATACCTTTCAATATCTCACCTTGCAagaattgtcacgccctgaccttagagagcctttttatgtctctatttggtttggtcagggtgtgatttgggtgggcattctatgttccttatTTCTCgtttttgtgtttctatgttttggccgggtatggttatcaatcagggacagctgtctatcgttgtctctgattgggaatcatacttaggcagcctgttttgccaccttaggttGTGTGATGTTGGTTTTTGTTAGCTCTGTGTAGCCTTCAGAACGTGACGgtcgttgttgtttttgttggtgTTCGGATGAATTaaagaatcatgaacacgtaccacgctgcaccttggtccacttcttccgaCGAGCGTTACAATAAtaatggcactgagcctttttccaaattgttttatgagttggagaacacatcgAGAGGGATCTTAAACCATTTCTCAATACAGAATACTTCCAGATACTTGATATCCTAAGTCTGCTCCTATGGACTGCACTAATAATTTCAAACCACatgttttcaatgggtttcaagtccGGAAACTGAGTTGgcaattgcaaaatgttgatttttgtgGCAAATTCTTCTTTCGACGCGAAACCCACAACTGGCGTGCccggccaaagagctctattttttttgtcatctgaccaaagcactgGTTCCAATCCAATTGCCAATGCcattttagcaaactccaggcatttacatttgttggatgacatgaaaatagagctaaTAAATGAGAATGCATAAGCAGAAAAGCACCCCATACccactgtaaaatatggtgatagatctttgatgttatggggctattttgcctCAACTGGTCcaggggcccttgttaaggtcaatgcCATCATGATCCTTACCCAGTACAAGGACATTTTAGCCTAAAACCTTGTTGCCTCTgacaggaggctgaaacttgacCTCAAGTGGATCGtttagcaagacaataacccaaaGCActcatcaaaatccacaaagaaatagtTAATTGTCTACAAAAATCGACATTTTGCAATGGCAATCTCAGACATGAACCCCATCTGAAAacgtggtttgaattgaagagggcagttcaTAAGCGCAGTGTAACGgtcgtcgtcggtggaagaaggtgaggaccaaagcgcagcgtggtaagtgttcatgttttttaataaagtaacgaacactgaacaaaacaataaacgtgaagttatcaaaccgaaacagtcccgtgtggcaccaACACTAACACGGAAAAAGTGTAACCAAGCTCCCTAAGTATGACTCTCAATCtgggacaatgattgacagctgcctctgattgagaaccataccaggccgaacacagCAATCCTAAAtcaatagaaaaaagaacatagacaacccacccaactcacgccctgaccattctaaaacaaagacataatataagaactaaggtcagaacgtgacacgcagactaaggatatcaaggatctgaaaGGATTCTGTATGCAGGAAGTGTCTAAGATcgctcccaatgtgttctccaactcattaAATATTTTAGAAAAAAGCTCAGTGCCGTTATCCTGGCAAGGTGAgatattgaaaggtattgaaaaccggggtgtcaatcatttttacCCTTACCTTTTCTCTTCAGCAagtgtattagtataaaataatagaatttttttttaaattggggaGCACAGTATATGAATGATTTAAttatttttgctcatctttatcaagggctTCAATAATgtcagaccccactgtatatgaagATAAAGGATCATGTGAAAAATGTTGCCTAATAGCACAATTGTACATGTCATTGCTCAATTGTGCCAGGCAGGTCAACTCAGTAAAGTGCAGTGTAAGTGTTTGAAAGAAAATGTATACTATTTTAACCCAGGTCTGTTACTGAGAGAAGGCACAGTGAAAGAAAAGGCAGAGTGAAGGAGAAgGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGACAGAGAAGGCAGAGTGACAGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAgagaaggcagagggaaggagaaggcacagtgaaagagaaggcacagtgaaggagaaggcacagtgaaagaggagacagagtgaAGGAGAAGGCACAGAGATGAGTGGGCCGACTGTGACTCACACACTGCTGCCACTGACCCCTAGCGTTCCCTCTGATAAACTCACATTATGTCTGCAGAGCCCCAGTGGCTCAGTACCACGCCAGCATGCCAGAATGCCCAGTAGGAGACAATCCCAATGTGTAATGTGATGCTGTGTGACAACAGCACTGGGCCTTTTTTACAAAGGCCAAGCACATTGCAGCACTGCGCGCTGAACTACACACAATTTTCCCCAGAGTTTGTGAAGCTCATGTTCATGGTAAACGCTGTGGATGTCAGCTCAAGTGGATATGAGCTTTCAATGTGAAACACTGTGCGCTTCATACTTTAACACGGAAGTAAGGGTAGACAAAATAGTTTGGCAACATAATATCATCAGCATCAAAACATTGACTGGCATCTGCATTCAAACAAACATGCATTTTATCATGGTCCAGCATAACACAATTCACCGAACGTTTTGCATGTAGATCCTGAGCTAAACAGTCTCTTGCATGATGAGATCCATTCCTTTATATGGCGATGATTTCACCATCATAGGGCTTCCTGATTACAGGACTAGGCTGTCCC
>TU266158
ATCTGTTTCAGTTGTTTAATGTCGATCAAAAACGACAGGGACAGTTTTGCTGACATCATCACGCAAACCAGACCTTCCCTAAATGTGCACGCCACTATTCAGTTCCCATCATGCACTTGGTGTTTAGTCACACCCCATTAGCATTATATCCAGACGCCACAATGCGCATCTACCACGGTGATTGTAGTGGGTCCTGACAGTGACACATCCCCCTTCACAGAATGCTGACAGTCAGTCAGGAGACGTACCCCTCTAAGCTTCCGTAACgttgaaatatgacatttaccaGATTATTTTGTCTCAAGGTATTTACAGTGGGGTTCAAAATTATGACtgcataaaataaataattaaaatactgaGCTACATTCTATACTCCAAaaaattgggaaattatattatttatactaatacaattgctgaGAGAACAATtgtgtttaacaagtaatataatTTTTTTCTCAAAGAGTTAGGGGTAAAAAATATTGACACCCCTGTTAACAATACCTTTCAATATCTCACCTTGCAagaattgtcacgccctgaccttagagagcctttttatgtctctatttggtttggtcagggtgtgatttgggtgggcattctatgttccttatTTCTCgtttttgtgtttctatgttttggccgggtatggttatcaatcagggacagctgtctatcgttgtctctgattgggaatcatacttaggcagcctgttttgccaccttaggttGTGTGATGTTGGTTTTTGTTAGCTCTGTGTAGCCTTCAGAACGTGACGgtcgttgttgtttttgttggtgTTCGGATGAATTaaagaatcatgaacacgtaccacgctgcaccttggtccacttcttccgaCGAGCGTTACAATAAtaatggcactgagcctttttccaaattgttttatgagttggagaacacatcgAGAGGGATCTTAAACCATTTCTCAATACAGAATACTTCCAGATACTTGATATCCTAAGTCTGCTCCTATGGACTGCACTAATAATTTCAAACCACatgttttcaatgggtttcaagtccGGAAACTGAGTTGgcaattgcaaaatgttgatttttgtgGCAAATTCTTCTTTCGACGCGAAACCCACAACTGGCGTGCccggccaaagagctctattttttttgtcatctgaccaaagcactgGTTCCAATCCAATTGCCAATGCcattttagcaaactccaggcatttacatttgttggatgacatgaaaatagagctaaTAAATGAGAATGCATAAGCAGAAAAGCACCCCATACccactgtaaaatatggtgatagatctttgatgttatggggctattttgcctCAACTGGTCcaggggcccttgttaaggtcaatgcCATCATGATCCTTACCCAGTACAAGGACATTTTAGCCTAAAACCTTGTTGCCTCTgacaggaggctgaaacttgacCTCAAGTGGATCGtttagcaagacaataacccaaaGCActcatcaaaatccacaaagaaatagtTAATTGTCTACAAAAATCGACATTTTGCAATGGCAATCTCAGACATGAACCCCATCTGAAAacgtggtttgaattgaagagggcagttcaTAAGCGCAGTGTAACGgtcgtcgtcggtggaagaaggtgaggaccaaagcgcagcgtggtaagtgttcatgttttttaataaagtaacgaacactgaacaaaacaataaacgtgaagttatcaaaccgaaacagtcccgtgtggcaccaACACTAACACGGAAAAAGTGTAACCAAGCTCCCTAAGTATGACTCTCAATCtgggacaatgattgacagctgcctctgattgagaaccataccaggccgaacacagCAATCCTAAAtcaatagaaaaaagaacatagacaacccacccaactcacgccctgaccattctaaaacaaagacataatataagaactaaggtcagaacgtgacacgcagactaaggatatcaaggatctgaaaGGATTCTGTATGCAGGAAGTGTCTAAGATcgctcccaatgtgttctccaactcattaAATATTTTAGAAAAAAGCTCAGTGCCGTTATCCTGGCAAGGTGAgatattgaaaggtattgaaaaccggggtgtcaatcatttttacCCTTACCTTTTCTCTTCAGCAagtgtattagtataaaataatagaatttttttttaaattggggaGCACAGTATATGAATGATTTAAttatttttgctcatctttatcaagggctTCAATAATgtcagaccccactgtatatgaagATAAAGGATCATGTGAAAAATGTTGCCTAATAGCACAATTGTACATGTCATTGCTCAATTGTGCCAGGCAGGTCAACTCAGTAAAGTGCAGTGTAAGTGTTTGAAAGAAAATGTATACTATTTTAACCCAGGTCTGTTACTGAGAGAAGGCACAGTGAAAGAAAAGGCAGAGTGAAGGAGAAgGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGACAGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGACAGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAGAGAAGGCAGAGTGAAGGAGAAGGCAGAGTGAAGGAGAAGGCACAGTGAAAgagaaggcagagggaaggagaaggcacagtgaaagagaaggcacagtgaaggagaaggcacagtgaaagaggagacagagtgaAGGAGAAGGCACAGAGATGAGTGGGCCGACTGTGACTCACACACTGCTGCCACTGACCCCTAGCGTTCCCTCTGATAAACTCACATTATGTCTGCAGAGCCCCAGTGGCTCAGTACCACGCCAGCATGCCAGAATGCCCAGTAGGAGACAATCCCAATGTGTAATGTGATGCTGTGTGACAACAGCACTGGGCCTTTTTTACAAAGGCCAAGCACATTGCAGCACTGCGCGCTGAACTACACACAATTTTCCCCAGAGTTTGTGAAGCTCATGTTCATGGTAAACGCTGTGGATGTCAGCTCAAGTGGATATGAGCTTTCAATGTGAAACACTGTGCGCTTCATACTTTAACACGGAAGTAAGGGTAGACAAAATAGTTTGGCAACATAATATCATCAGCATCAAAACATTGACTGGCATCTGCATTCAAACAAACATGCATTTTATCATGGTCCAGCATAACACAATTCACCGAACGTTTTGCATGTAGATCCTGAGCTAAACAGTCTCTTGCATGATGAGATCCATTCCTTTATATGGCGATGATTTCACCATCATAGGGCTTCCTGATTACAGGACTAGGCTGTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266156 False 3513 lncRNA 0.42 2 19404919 19408499
TU266157 False 3459 lncRNA 0.42 3 19404919 19408499
TU266158 True 3527 lncRNA 0.42 2 19404919 19408499

Neighbor

gene id symbol gene type direction distance location
LOC110511176 LOC106579058 coding downstream 122551 19065512 ~ 19282368 (-)
LOC110511207 oxr1 coding downstream 380767 18826879 ~ 19024152 (-)
LOC110511312 LOC106605543 coding downstream 607550 18793985 ~ 18797369 (-)
LOC110511352 LOC106605528 coding downstream 698445 18697337 ~ 18706474 (-)
LOC110511375 NA coding downstream 728279 18633399 ~ 18676640 (-)
rims2a LOC106579570 coding upstream 7555 19416054 ~ 19652601 (-)
LOC110512409 LOC106605396 coding upstream 246784 19655283 ~ 19667465 (-)
LOC110512480 flot1 coding upstream 353877 19762376 ~ 19785561 (-)
LOC110512516 LOC106579712 coding upstream 434211 19827342 ~ 19851108 (-)
LOC110512609 LOC106579779 coding upstream 468998 19877497 ~ 19895848 (-)
G232835 NA non-coding downstream 15933 19388032 ~ 19388986 (-)
G232105 LOC106597055 non-coding downstream 171402 19225570 ~ 19233517 (-)
G232065 NA non-coding downstream 273936 19130646 ~ 19130983 (-)
G232064 NA non-coding downstream 275163 19129473 ~ 19129756 (-)
G232063 NA non-coding downstream 277888 19126692 ~ 19127031 (-)
G232873 NA non-coding upstream 62707 19471206 ~ 19471551 (-)
G232883 NA non-coding upstream 77313 19485812 ~ 19486777 (-)
G232898 NA non-coding upstream 100680 19509179 ~ 19510193 (-)
G232921 NA non-coding upstream 144636 19553135 ~ 19554542 (-)
G232971 NA non-coding upstream 225465 19633964 ~ 19634713 (-)
G231652 rn146 other downstream 803044 18599730 ~ 18601875 (-)
LOC110503747 lars2 other downstream 1273865 18093704 ~ 18154474 (-)
LOC110505118 LOC106579600 other downstream 1427010 17975160 ~ 17985544 (-)
G229707 NA other downstream 2356575 17043792 ~ 17048344 (-)
G232980 NA other upstream 239587 19648086 ~ 19648629 (-)
G233052 LOC106605397 other upstream 347705 19756204 ~ 19757908 (-)
G233513 LOC106561082 other upstream 1143284 20551783 ~ 20551997 (-)
glipr2l LOC106605424 other upstream 1240272 20648378 ~ 20652052 (-)

Expression


Co-expression Network