Gene
RNA
| Item | Value |
|---|---|
| gene id | G232321 |
| gene name | LOC106579570 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 19604263 ~ 19604688 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: regulating synaptic membrane exocytosis protein 2-like isoform X5 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU265624 | True | 426 | lncRNA | 0.49 | 1 | 19604263 | 19604688 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110512399 | dpys | coding | upstream | 195765 | 19356772 ~ 19408498 (+) |
| LOC110511188 | LOC106605483 | coding | upstream | 538060 | 19044307 ~ 19066203 (+) |
| LOC110511248 | LOC106579093 | coding | upstream | 777541 | 18819001 ~ 18826722 (+) |
| LOC110511268 | LOC106605544 | coding | upstream | 791217 | 18801968 ~ 18813046 (+) |
| LOC110511301 | LOC106579115 | coding | upstream | 810544 | 18720911 ~ 18793719 (+) |
| LOC110512421 | LOC106579530 | coding | downstream | 62910 | 19667598 ~ 19674027 (+) |
| LOC110512436 | LOC106579516 | coding | downstream | 69476 | 19674164 ~ 19682731 (+) |
| LOC110503829 | LOC106605397 | coding | downstream | 90435 | 19695123 ~ 19762329 (+) |
| LOC110503837 | LOC106605407 | coding | downstream | 196551 | 19801239 ~ 19801909 (+) |
| LOC110512494 | LOC106579625 | coding | downstream | 198298 | 19802986 ~ 19819461 (+) |
| G232318 | NA | non-coding | upstream | 3884 | 19600173 ~ 19600379 (+) |
| G232317 | NA | non-coding | upstream | 4390 | 19599627 ~ 19599873 (+) |
| G232297 | NA | non-coding | upstream | 42718 | 19561209 ~ 19561545 (+) |
| G232215 | NA | non-coding | upstream | 185680 | 19413977 ~ 19418583 (+) |
| G232205 | NA | non-coding | upstream | 208337 | 19391802 ~ 19395926 (+) |
| G232322 | NA | non-coding | downstream | 1020 | 19605708 ~ 19606009 (+) |
| G232333 | NA | non-coding | downstream | 30004 | 19634692 ~ 19635057 (+) |
| G232355 | NA | non-coding | downstream | 158032 | 19762720 ~ 19765169 (+) |
| G232354 | flot1 | non-coding | downstream | 169629 | 19774317 ~ 19775179 (+) |
| G231983 | LOC106597055 | other | upstream | 369968 | 19226366 ~ 19234295 (+) |
| G231438 | NA | other | upstream | 752281 | 18851249 ~ 18851982 (+) |
| LOC110511593 | LOC106579240 | other | upstream | 1017422 | 18569698 ~ 18588248 (+) |
| G230916 | NA | other | upstream | 1308158 | 18295354 ~ 18296105 (+) |
| LOC100653482 | mrap2 | other | upstream | 2805331 | 16794699 ~ 16801793 (+) |
| LOC110512505 | LOC106579702 | other | downstream | 222442 | 19821356 ~ 19844652 (+) |
| G233521 | LOC106579937 | other | downstream | 954088 | 20558776 ~ 20565712 (+) |
| G233545 | NA | other | downstream | 1003605 | 20608293 ~ 20608725 (+) |
| G234322 | dcst2 | other | downstream | 1659387 | 21264075 ~ 21264506 (+) |
| G234340 | LOC106580151 | other | downstream | 1682038 | 21286726 ~ 21287002 (+) |
