G233080


Basic Information

Item Value
gene id G233080
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19811763 ~ 19813710 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266463
cacacacggacactaaacacacacacacggacactaaacacacacacacggacactaaacacacacacacggacactaaacacacacacacggacactaaacacacacactgacactaaacacacacactgacactaaacacacacactgacactaaacacacacactgacactaaacacacacactgacactaaacacacacactgacactaaacacacacacactgacactaaacacacacactgacactaaacacacacacggacactaaacacacacacggacactaaacacacacacggacacaaaacacacacacggacactaaacacacacacacggacactaaacactgacactaaacacacacacacggacactaaacacacacacacggacactaaacacacacacactaaacacacacacacggacactggACACTAAACACACGGACACTAAACAcacggacactaaacacacacacacggacactaaacacaca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266463 True 507 lncRNA 0.54 2 19811763 19813710

Neighbor

gene id symbol gene type direction distance location
LOC110512480 flot1 coding downstream 26202 19762376 ~ 19785561 (-)
LOC110512409 LOC106605396 coding downstream 144298 19655283 ~ 19667465 (-)
rims2a LOC106579570 coding downstream 159197 19416054 ~ 19652601 (-)
LOC110511176 LOC106579058 coding downstream 529395 19065512 ~ 19282368 (-)
LOC110511207 oxr1 coding downstream 787611 18826879 ~ 19024152 (-)
LOC110512516 LOC106579712 coding upstream 29000 19827342 ~ 19851108 (-)
LOC110512609 LOC106579779 coding upstream 63787 19877497 ~ 19895848 (-)
g6f-like-b g6f-like-b coding upstream 100810 19914520 ~ 19931740 (-)
LOC110512652 riiad1 coding upstream 200882 20014592 ~ 20018502 (-)
dnah5 LOC106579813 coding upstream 210200 20023910 ~ 20090697 (-)
G233052 LOC106605397 non-coding downstream 53855 19756204 ~ 19757908 (-)
G232999 NA non-coding downstream 71539 19736084 ~ 19740224 (-)
G233001 NA non-coding downstream 135989 19674396 ~ 19675774 (-)
G232978 NA non-coding downstream 167772 19643780 ~ 19643991 (-)
G233082 LOC106605400 non-coding upstream 4583 19818293 ~ 19821202 (-)
G233090 NA non-coding upstream 38522 19852232 ~ 19852446 (-)
G233064 NA non-coding upstream 49588 19863298 ~ 19863882 (-)
G233096 LOC106579727 non-coding upstream 57556 19871266 ~ 19872229 (-)
G232980 NA other downstream 163134 19648086 ~ 19648629 (-)
G231652 rn146 other downstream 1209888 18599730 ~ 18601875 (-)
G233513 LOC106561082 other upstream 738073 20551783 ~ 20551997 (-)
glipr2l LOC106605424 other upstream 835061 20648378 ~ 20652052 (-)
G234224 LOC106605437 other upstream 1364887 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 1631778 21438546 ~ 21455972 (-)
G234600 NA other upstream 1655951 21469661 ~ 21469945 (-)

Expression


Co-expression Network