G232341


Basic Information

Item Value
gene id G232341
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 19898442 ~ 19905535 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265645
attaaaacatgtaatgacgcattcacggactgttgttaaacacactgataacccatgaatatacactgctccaaaccctTTGGGATGGGCTACAAAGACAATGAACTCTGTCAAGAACCAATGAGATACAGACAACAGGctggagaggactgtctatcacCTACGAACAACCAACCAGGAGCCAGGACTACTAGAATCTACCTACGTCATTCCAATGTATAAATGTACTGCCCAAATATGTGTTACGCTCTCTTTTTCCGAAACCTCCCTAAGAGTGGACGATGAGAGCCGTGCTGCACGTTTGCCAGATATCACTATGCTAGATTAAAAGGCCTCAAATATACCGTATCCGCCTTGTCCAGAGTCTCATCTTGGTCTTGTCTCTCCTATAACTAATTCATT
>TU265646
attaaaacatgtaatgacgcattcacggactgttgttaaacacactgataacccatgaatatacactgctccaaaccctTTGGGATGGGCTACAAAGACAATGAACTCTGTCAAGAACCAATGAGATACAGACAACAGGctggagaggactgtctatcacctACGAACAACCAACCAGGAGCCAGGACTACTAGAATCTACCTACGTCATTCCAATGTATAAATGTACTGCCCAAATATGTGTTACGCTCTCTTTTTCCGAAACCTCCCTAAGAGTGGACGATGAGAGCCGTGCTGCACGTTTGCCAGATATCACTATGCTAGATTAAAAGGCCTCAAATATACCGTATCCGCCTTGTCCAGAGTCTCATCTTGGTCTTGTCTCTCCTATAACTAATTCATT
>TU265647
attaaaacatgtaatgacgcattcacggactgttgttaaacacactgataacccatgaatatacactgctccaaaccctTTGGGATGGGCTACAAAGACAATGAACTCTGTCAAGAACCAATGAGATACAGACAACAGGctggagaggactgtctatcacctACGAACAACCAACCAGGAGCCAGGACTACTAGAATCTACCTACGTCATTCCAATGTATAAATGTACTGCCCAAATATGTGTTACGCTCTCTTTTTCCGAAACCTCCCTAAGAGTGGACGATGAGAGCCGTGCTGCACGTTTGCCAGATATCACTATGCTAGATTAAAAGGCCTCAAATATACCGTATCCGCCTTGTCCAGAGTCTCATCTTGGTCTTGTCTCTCCTATAACTAATTCATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265645 False 402 lncRNA 0.41 2 19898442 19905535
TU265646 False 402 lncRNA 0.43 2 19898442 19905535
TU265647 True 402 lncRNA 0.43 2 19898442 19905535

Neighbor

gene id symbol gene type direction distance location
LOC110512599 LOC106579727 coding upstream 21298 19863975 ~ 19877144 (+)
LOC110512626 LOC106579786 coding upstream 34560 19858980 ~ 19863882 (+)
LOC110512558 NA coding upstream 40827 19852621 ~ 19857677 (+)
LOC110512505 LOC106579702 coding upstream 53991 19821356 ~ 19844652 (+)
LOC110512494 LOC106579625 coding upstream 78981 19802986 ~ 19819461 (+)
LOC110512638 LOC106605406 coding downstream 24541 19930076 ~ 20016410 (+)
LOC110512678 LOC106579830 coding downstream 186540 20092075 ~ 20232416 (+)
LOC110512735 NA coding downstream 372643 20278178 ~ 20346029 (+)
LOC110512801 LOC106579904 coding downstream 448882 20354417 ~ 20440018 (+)
LOC110512870 LOC106605416 coding downstream 541134 20446669 ~ 20473526 (+)
G232415 NA non-coding upstream 46411 19851797 ~ 19852031 (+)
G232414 NA non-coding upstream 47171 19850960 ~ 19851271 (+)
G232413 NA non-coding upstream 63965 19833042 ~ 19834477 (+)
G232448 NA non-coding downstream 60198 19965733 ~ 19966496 (+)
G232520 NA non-coding downstream 173109 20078644 ~ 20080490 (+)
G232545 NA non-coding downstream 205604 20111139 ~ 20147888 (+)
G232673 NA non-coding downstream 488277 20393812 ~ 20466345 (+)
G231983 LOC106597055 other upstream 664147 19226366 ~ 19234295 (+)
G231438 NA other upstream 1046460 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 1311601 18569698 ~ 18588248 (+)
G230916 NA other upstream 1602337 18295354 ~ 18296105 (+)
G233521 LOC106579937 other downstream 653241 20558776 ~ 20565712 (+)
G233545 NA other downstream 702758 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 1358540 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 1381191 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 2112059 22017579 ~ 22037490 (+)

Expression


Co-expression Network