G232545


Basic Information

Item Value
gene id G232545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20111139 ~ 20147888 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU265875
gtatttatcatcattagtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaagggtggctgactaattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcacaaaaaaatacagttttatatCTGTTTCTTATACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU265875 True 247 lncRNA 0.34 2 20111139 20147888

Neighbor

gene id symbol gene type direction distance location
LOC110512638 LOC106605406 coding upstream 94729 19930076 ~ 20016410 (+)
LOC110512599 LOC106579727 coding upstream 233995 19863975 ~ 19877144 (+)
LOC110512626 LOC106579786 coding upstream 247257 19858980 ~ 19863882 (+)
LOC110512558 NA coding upstream 253524 19852621 ~ 19857677 (+)
LOC110512505 LOC106579702 coding upstream 266688 19821356 ~ 19844652 (+)
LOC110512735 NA coding downstream 130290 20278178 ~ 20346029 (+)
LOC110512801 LOC106579904 coding downstream 206529 20354417 ~ 20440018 (+)
LOC110512870 LOC106605416 coding downstream 298781 20446669 ~ 20473526 (+)
LOC110512886 LOC106579923 coding downstream 342980 20490868 ~ 20508431 (+)
LOC110512899 LOC106579931 coding downstream 361404 20509292 ~ 20531339 (+)
G232520 NA non-coding upstream 30649 20078644 ~ 20080490 (+)
G232448 NA non-coding upstream 144643 19965733 ~ 19966496 (+)
G232341 NA non-coding upstream 205604 19898442 ~ 19905535 (+)
G232673 NA non-coding downstream 245924 20393812 ~ 20466345 (+)
G232719 NA non-coding downstream 333818 20481706 ~ 20481949 (+)
G232733 NA non-coding downstream 358138 20506026 ~ 20506658 (+)
G231983 LOC106597055 other upstream 876844 19226366 ~ 19234295 (+)
G231438 NA other upstream 1259157 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 1524298 18569698 ~ 18588248 (+)
G230916 NA other upstream 1815034 18295354 ~ 18296105 (+)
G233521 LOC106579937 other downstream 410888 20558776 ~ 20565712 (+)
G233545 NA other downstream 460405 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 1116187 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 1138838 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 1869706 22017579 ~ 22037490 (+)

Expression


Co-expression Network