G232673


Basic Information

Item Value
gene id G232673
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20393812 ~ 20466345 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266014
CTTTAGTACACAAGGCCCACACTGGAAAACAAATGTGtgaatttacagttgaagtcggaagtttacatacactaggttggagtcattaaaactagtttttcaaccactccacaaatttcttgttacaaactatagttttggcaagtcggttaggacatctactgtgtgcatgacacaagtaatttttccaacaattgtttacagacagattatttcacttataaatcactgtatcacaattccagtaagtcaaaagtttacatacactaagttgactgtgcctttaaacagcttggaaaatcccagaaaat

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266014 True 311 lncRNA 0.35 2 20393812 20466345

Neighbor

gene id symbol gene type direction distance location
LOC110512735 NA coding upstream 47783 20278178 ~ 20346029 (+)
LOC110512678 LOC106579830 coding upstream 161396 20092075 ~ 20232416 (+)
LOC110512638 LOC106605406 coding upstream 377402 19930076 ~ 20016410 (+)
LOC110512599 LOC106579727 coding upstream 516668 19863975 ~ 19877144 (+)
LOC110512626 LOC106579786 coding upstream 529930 19858980 ~ 19863882 (+)
LOC110512886 LOC106579923 coding downstream 24523 20490868 ~ 20508431 (+)
LOC110512899 LOC106579931 coding downstream 42947 20509292 ~ 20531339 (+)
tbrg4 LOC106579951 coding downstream 138820 20605165 ~ 20622065 (+)
LOC110512944 LOC106605423 coding downstream 163067 20629412 ~ 20647074 (+)
LOC118946510 NA coding downstream 235859 20702204 ~ 20709034 (+)
G232545 NA non-coding upstream 245924 20111139 ~ 20147888 (+)
G232520 NA non-coding upstream 313322 20078644 ~ 20080490 (+)
G232448 NA non-coding upstream 427316 19965733 ~ 19966496 (+)
G232341 NA non-coding upstream 488277 19898442 ~ 19905535 (+)
G232719 NA non-coding downstream 15361 20481706 ~ 20481949 (+)
G232733 NA non-coding downstream 39681 20506026 ~ 20506658 (+)
G233507 LOC106566552 non-coding downstream 82061 20548406 ~ 20548665 (+)
G233508 NA non-coding downstream 82465 20548810 ~ 20549016 (+)
LOC110512505 LOC106579702 other upstream 549160 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 1159517 19226366 ~ 19234295 (+)
G231438 NA other upstream 1541830 18851249 ~ 18851982 (+)
LOC110511593 LOC106579240 other upstream 1806971 18569698 ~ 18588248 (+)
G230916 NA other upstream 2097707 18295354 ~ 18296105 (+)
G233521 LOC106579937 other downstream 92431 20558776 ~ 20565712 (+)
G233545 NA other downstream 141948 20608293 ~ 20608725 (+)
G234322 dcst2 other downstream 797730 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 820381 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 1551249 22017579 ~ 22037490 (+)

Expression


Co-expression Network