G233457


Basic Information

Item Value
gene id G233457
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20471028 ~ 20474427 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266871
tccgaaggcactgtatatgttataATTAGTAtactactgtcacgttctgaccttagttcctttgttttgtctttgttttagtatggtcagggcgttagttggggtgggcagtttatgttcgtttttctatgatttgtgatttctgtgtttgtcctggtatggttctcaatcagaggcagctgtctatcgttgtccctgattgagaaccatacttaggtagcctgttttcaccctttagttgtgggtgattgttttctgttgtgtgtctgcaccagccagaactgttttcggtcgttctctttgttatttccgtgttcatttaataaatatggacacataccacgctgcaccttggtcctcctcttcttccaccaccaacggccgttacaacTACCATAAGTATTGGCGTGTTCTCGCATGcatttgcatatttccattagGGATTGCCTCCTCTGTGAAGTGTGCAATAACTAAATTCAACTTTTGCATTCCTTCTAAacaacttagtccactctgttgaTAACacattctagttttgggaacagaaaaccgtattgagatcaaatgattAATGGATGAGAATGTGCATTGTCGcccaaaatccatctcgttccatTTTCTCCCACTGCTGAccagtgggcttcctctcacatgtatacatccagtgaaatatcCATCTCATTTTTCCGTCTGTGGTTTTACTGCTCCAACCCTCACTGGACTGTGACAATGCTTCCATCTAGTGGTTTGCAAGGGCGTCACAAACTCCTAAAGACAATGTATTTGAAAGGGTATGATCTGATAGTGCTGATTGAGTTTTAAATAGGCTAATCATACATAATCAGTTGTGGGTACCAATGGACCGTTCCAATCCAATATGAAAGTATGACATACTCAAACACACAttgcaaacacatttattttgttgTGTAAAGAGGACCGTACAATGATGCCACAAGGCAGACAAGCAGCAGGAAGCCACAAAGCCACTCAATGCctataaaataatacatgtaCACTTCAAAAAACATAGGATTGCACTACCAGCTTATTGCCAGGTAAAAGCTGATCAAGCGTACAATGCAATTTCCCCCTAGTGTTGACTGAAGCGGTCAGCCCAGTGCTGGTTATATCAAGTAAAGACacaaaagagacagagacatattctacacacacacccctccattCCTCATTCAAAAGGCACACTTGACTTGTGAATCAAACCAGTGAGAGAGATTTTATCTCTTAAGATGACTTAATAAATGTTGAGTGACTCTGACAAGCTGGGATTCACAGCTTAAAGGTCTAATCCAATTCAACTGGTTTGTTTATCCAACAGTCCAACAGAAACAGATGTGCATACAGTAAAGCACACATTTGAAACTCATTCATATTAGCTTAAGGAGAGACCCTCAAGTCAATTCCTCCTTGGCTCACTGCTACTGCTGAGGGCATTAAGTGAAGCTAGGTACATATTGTTTTTGTGTCTCTTCAAATCAACTGAGACATTAACTGTTGTCTGAATATTTTATTCATGCACTTCAGGGCAAAGGCCTACTGTAAGTGTTTTAACTGATGCTCCCATAAGAGCTCTTATGTGTCTCATGGGTTATTATGATGTTCAAGACAAAGCTGGTTAtgaaccagggttggggtcaattcctttTTAAGTTAGTCGATTatggaattacattttttttctcaatgCTTCTCTAGGAGAACATTTTGGAATTGGAATTTTAGTTTATTTTCAGAattgactgaatttaaatgtGAATGGCCCCAACTCTGGCATACGATACCTGTGTCTCTGGCATACGATACCTGTGTCTCTGGCATACGatatctgtatctctctttggCATAATCTCAACATGCTGTTCATTTTTGTACTTTTTTGTCTTCATTAAAACAATGAACAGCTCAAACCTTGGAAGGCAATACTTCAGACAAACAGCAAGACTAAAAGGTTAGTCTTTTGTATCTCTTCTTACTGTATAATGGTGCCAAAACATACAATGTTTTCTGACTCTTAAAACCTTGTTTTAGGGACATAGACTACACCAATGTTTTAATCAATATGTCGCTAAGGGGATAAATAATGTTGTACTGAATTGAATATCTCTACTAATCACTCCACTAGAGCAGATAAACACAGCTGAGTGATCAGAGCCTGGATAAACCTCAGACAGGATAAAGCCCCACTCATACTAAGTCCTTGCAACTCAGTCTGTCTGGTTTTACAAAGAACACATGCTTGTGTATTGTCAGTAAACCCTACACTACAGTAACTTATCAGGCAAAACCTTAACATCTGGATATGATTTGCTTCACCCAAAAATCACCTTTAATTTAGTCACGCGCACCCACACAAATTCATTGATTCACATACaaccacacaaaacacacatataAATACACACATGGGATCCGACAGCAGAGAGAAAGGGCTGCAATTTGCTGATGATGTAAACACAGTGAGATCACAGCAGGTTGGTGCCACCtcaattggggaggatgggctcgtggtaatgactggtatcggagtcagtggaatggtatcaaatacgtcaaacgcatggtttgatgccattccagtccctccgtttcagccattattatgagccgtcctcccctcagcagcctccactgagtgAGATCCAGGCCTGTAGCATCTCAGAGTAGGCATCAAACCGTGCTgaactaggatcagtttagccttttactTCATAAGGAATAAGATAACATGgaaactcctactctgagacgctttttGAATACCGGCCATGGTCAGGTGGGGTTAGGGCCCTTATTcatcaagcatctcagagtaggagtgctgatctaagatcagtttctaagatcagtttagccttttagattataatgaatggacaggggggacctgatcctagacatgcACTCTTACTCTGAAATACTGCTTGATACATACAGCTCCTGGACCAACCCAGCCTGTCTAGTCCATGTGGATAGTCAGTGGGGCAGCTCCTGCATGACCTCTTCGGCCAGCTGTGTGATGAGTTGCCAGGCCTCGCGGATGTGACGTGACTCGGTGGTGCGGGCGCAGAGGGCGAAGCGCAGCACAAACTGACCAGACAGCAGGCACGGCACCAGGTGGATCTTCCTGCCATTGTTGATCCTCTTCAGCAAGGTCTCAT

Function

NR:

description
aromatic-L-amino-acid decarboxylase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266871 True 3179 lncRNA 0.43 2 20471028 20474427

Neighbor

gene id symbol gene type direction distance location
LOC110512719 LOC106579893 coding downstream 195720 20272374 ~ 20275308 (-)
LOC110512703 LOC106579851 coding downstream 200656 20262526 ~ 20270372 (-)
dnah5 LOC106579813 coding downstream 380331 20023910 ~ 20090697 (-)
LOC110512652 riiad1 coding downstream 452526 20014592 ~ 20018502 (-)
g6f-like-b g6f-like-b coding downstream 539288 19914520 ~ 19931740 (-)
LOC118944500 NA coding upstream 78326 20552753 ~ 20554867 (-)
LOC110512912 LOC106579937 coding upstream 89221 20563648 ~ 20581532 (-)
trnat-ugu-31 NA coding upstream 108853 20583280 ~ 20583352 (-)
LOC110512925 NA coding upstream 116019 20590446 ~ 20595555 (-)
trnat-ugu-32 NA coding upstream 117629 20592056 ~ 20592128 (-)
G233430 NA non-coding downstream 26386 20435543 ~ 20444642 (-)
G233366 NA non-coding downstream 121126 20349637 ~ 20349902 (-)
G233136 LOC106579633 non-coding downstream 473151 19961733 ~ 19997877 (-)
G233098 NA non-coding downstream 550415 19898441 ~ 19920613 (-)
G233460 NA non-coding upstream 6893 20481320 ~ 20481533 (-)
G233472 NA non-coding upstream 22459 20496886 ~ 20497524 (-)
G233475 LOC106579923 non-coding upstream 25720 20500147 ~ 20500409 (-)
G233474 LOC106579923 non-coding upstream 26682 20501109 ~ 20501347 (-)
G233478 NA non-coding upstream 30799 20505226 ~ 20505626 (-)
G233052 LOC106605397 other downstream 714410 19756204 ~ 19757908 (-)
G232980 NA other downstream 822399 19648086 ~ 19648629 (-)
rims2a LOC106579570 other downstream 871927 19416054 ~ 19652601 (-)
LOC110511176 LOC106579058 other downstream 1188890 19065512 ~ 19282368 (-)
G231652 rn146 other downstream 1869153 18599730 ~ 18601875 (-)
G233513 LOC106561082 other upstream 77356 20551783 ~ 20551997 (-)
glipr2l LOC106605424 other upstream 174344 20648378 ~ 20652052 (-)
G234224 LOC106605437 other upstream 704170 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 971061 21438546 ~ 21455972 (-)
G234600 NA other upstream 995234 21469661 ~ 21469945 (-)

Expression


Co-expression Network