G233550


Basic Information

Item Value
gene id G233550
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20627031 ~ 20627367 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU266979
ttttgtagtgactggttatattgatacaccatccaaagtgtaattaataacttcaccatgctcaaaggcatattcaatgtctgccatattttacccatctaccaatatgtgcTCTTCTTTGtatttgaatctgtgtttgaaattccctgtttgaccttacagatcattgtatgtgtgaagtacagagatgaggtagtcattcaaaaatcatgttaaacactattattgcccacattccatgcaacttattgtgacTTGTTacgcacatttttactcctgaacttatttaggcttgccataataaaagggttgaatacttatttactcagaacatttc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU266979 True 337 lncRNA 0.35 1 20627031 20627367

Neighbor

gene id symbol gene type direction distance location
tbrg4 LOC106579951 coding upstream 4966 20605165 ~ 20622065 (+)
LOC110512899 LOC106579931 coding upstream 95692 20509292 ~ 20531339 (+)
LOC110512886 LOC106579923 coding upstream 118600 20490868 ~ 20508431 (+)
LOC110512870 LOC106605416 coding upstream 153505 20446669 ~ 20473526 (+)
LOC110512801 LOC106579904 coding upstream 187013 20354417 ~ 20440018 (+)
LOC110512944 LOC106605423 coding downstream 2045 20629412 ~ 20647074 (+)
LOC118946510 NA coding downstream 74837 20702204 ~ 20709034 (+)
LOC118936416 steap4 coding downstream 91490 20718857 ~ 20758800 (+)
LOC110503853 LOC106579991 coding downstream 131442 20758809 ~ 20783316 (+)
LOC118946512 LOC106579994 coding downstream 219630 20846997 ~ 20911413 (+)
G233546 NA non-coding upstream 7206 20608900 ~ 20619825 (+)
G233515 NA non-coding upstream 73708 20552815 ~ 20553323 (+)
G233508 NA non-coding upstream 78015 20548810 ~ 20549016 (+)
G233507 LOC106566552 non-coding upstream 78366 20548406 ~ 20548665 (+)
G232733 NA non-coding upstream 120373 20506026 ~ 20506658 (+)
G233644 NA non-coding downstream 147528 20774895 ~ 20778525 (+)
G233687 NA non-coding downstream 285787 20913154 ~ 20915815 (+)
G233754 NA non-coding downstream 300531 20927898 ~ 20932727 (+)
G233753 LOC106580016 non-coding downstream 336389 20963756 ~ 20964155 (+)
G233820 NA non-coding downstream 469630 21096997 ~ 21100178 (+)
G233545 NA other upstream 18306 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 61319 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 782379 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 1392736 19226366 ~ 19234295 (+)
G231438 NA other upstream 1775049 18851249 ~ 18851982 (+)
G234322 dcst2 other downstream 636708 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 659359 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 1390227 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 1431175 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 1677126 22303641 ~ 22304906 (+)

Expression


Co-expression Network