G233644


Basic Information

Item Value
gene id G233644
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20774895 ~ 20778525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267077
agtgtcacgccctgaccatagtttactttgtattttctatgttttgattggtcagggtgtgatctgagtgggcattctatgttacatgtctagtttgtctagttctatgttcggcctgatatggttctcaatcagaggcaggtgttcgtcattgtctctgattgggaaccatatttaggtagcctgggtttcactgtgtgtttgtgggtgattgttcctgtctatgtgttttcaccagatagggctgtttaggtttttcgttacgttcatcacgttctttattttgtagtgtttgtactgattcgtgttttacgtttgttcattaaaacatggatcgcaatctacacgctgcattttggtccgactctccttctcataaagaaaaccgttacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267077 True 394 lncRNA 0.48 2 20774895 20778525

Neighbor

gene id symbol gene type direction distance location
LOC118936416 steap4 coding upstream 16095 20718857 ~ 20758800 (+)
LOC118946510 NA coding upstream 65861 20702204 ~ 20709034 (+)
LOC110512944 LOC106605423 coding upstream 127821 20629412 ~ 20647074 (+)
tbrg4 LOC106579951 coding upstream 152830 20605165 ~ 20622065 (+)
LOC110512899 LOC106579931 coding upstream 243556 20509292 ~ 20531339 (+)
LOC118946512 LOC106579994 coding downstream 68472 20846997 ~ 20911413 (+)
mindy3 LOC106580009 coding downstream 189919 20968444 ~ 21022357 (+)
itga8 LOC106580029 coding downstream 247612 21026137 ~ 21091292 (+)
LOC110513109 muc1 coding downstream 378651 21157176 ~ 21164038 (+)
LOC118946533 NA coding downstream 388025 21166550 ~ 21169783 (+)
G233550 NA non-coding upstream 147528 20627031 ~ 20627367 (+)
G233546 NA non-coding upstream 155070 20608900 ~ 20619825 (+)
G233515 NA non-coding upstream 221572 20552815 ~ 20553323 (+)
G233508 NA non-coding upstream 225879 20548810 ~ 20549016 (+)
G233507 LOC106566552 non-coding upstream 226230 20548406 ~ 20548665 (+)
G233687 NA non-coding downstream 134629 20913154 ~ 20915815 (+)
G233754 NA non-coding downstream 149373 20927898 ~ 20932727 (+)
G233753 LOC106580016 non-coding downstream 185231 20963756 ~ 20964155 (+)
G233820 NA non-coding downstream 318472 21096997 ~ 21100178 (+)
G233824 NA non-coding downstream 328960 21107485 ~ 21107689 (+)
G233545 NA other upstream 166170 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 209183 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 930243 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 1540600 19226366 ~ 19234295 (+)
G231438 NA other upstream 1922913 18851249 ~ 18851982 (+)
G234322 dcst2 other downstream 485550 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 508201 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 1239069 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 1280017 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 1525968 22303641 ~ 22304906 (+)

Expression


Co-expression Network