G234069


Basic Information

Item Value
gene id G234069
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 20914147 ~ 20915906 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267544
CAGTCAGTCTTTGACTCTCTACGCCTCAGCAGGACAGATATATTTACATTACATTGTACACCAGATATATGGAAACATGTTATTACATTTCCCTGCATTccattttatgtgtgtgtgttgtcccagGGATGATAGTCTTTATGTTTAAGTTACGGTATTTCCAGCTTTTAATGTGATTGATGCCTTTTTGTACACATGCTTAACTAACCTGTATGAAACGGAGATGGCCCTTACTTTTTCTtgatctctatctctctttctctccctcttttctcacCTTTTGTTCTCTCACTAAATCTGtcaagcgctctctctctctctcccttacactttctcttctttctctctcgctctgctctttctctcaattcaattaaattcacttcaattcAAAGGGGATTTACGGGCATGGAAAACACATgtttatattgccaaagcaagtgaaaaacaataaacaaaagtgataTGAGCAATCAGGAATTAATAGTTAACATTACAAACACAAAAGTTTCAAAAGGAAAAAGACAtctcaaatgttatattattagCTAGgtatagtgttgtaacagtgtgcaAATAGTTGTAGTATGAATGGCAAGGGAAAATAAACAGATATAGTTTGTATTTACAAAGGTGTTTGTGcACAGCCCAATAAGGGCTCATGCGCCTGTCTGACATTGGTCTAGTTGTGTTTTATTTAATAAATCATTTTCAAAGTAACCCTACAAAAAGTCATTCATATACCTTTTTCATTTACACATGTACTAGGAAGATAAGTATTTGTTTACTGGGCTTCAATAATGTGACCGATCAAAGTCCCTCAGGCCTTGATAAATAATTAAACTGATTGAAATTAAGGGGATATTGGTGAGCAAGTGCCATGAGTGGAACTTACTTAGGTGTTCAAAAGTGCATGCCAGACCGAGAGCCTAACTCTTCTTACTTCTTCATGAGTTTTAGTTTAGAAAACGATCtcttcacagacagacagttacagGGATGGTTATAAACCGCTTGATTGCCGTAGCAACATCAGGGAAACTGTGAAGAATGGAGTGGTGCTTCAAATATAGCAGTTCTGCAATATCATTAATTGAGCCTCTCGCAGTCTCCTTAATTGTAGGCCTAGGAAGCGCTGGGACATGTTGTCTGTATACTGGACAGCCAGTAAATTGGCAGATGCAAACAGATATATCTTTAGTGGACAACAGTTCTTACGTTCTTGATTTTGTTCATGCTGGTGAACTGTCATTTGGGTTGTGGTTGCAATATTAACAGTCCCTTATCTCTTGGTATATATTGCTATGCACCATTCAAGACTAAGTTTAAATTGTGTGCAGCGCAATGGACAAATAATGCACAATGTCGCAGAAAAATCTGTATGGGTTGTCAATACTCAGTATAGAAAACAGTCGGACCTGTCCGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267544 True 1428 lncRNA 0.44 2 20914147 20915906

Neighbor

gene id symbol gene type direction distance location
glipr2l LOC106605424 coding downstream 262095 20648378 ~ 20652052 (-)
LOC110512925 NA coding downstream 318592 20590446 ~ 20595555 (-)
trnat-ugu-32 NA coding downstream 322019 20592056 ~ 20592128 (-)
trnat-ugu-31 NA coding downstream 330795 20583280 ~ 20583352 (-)
LOC110512912 LOC106579937 coding downstream 332615 20563648 ~ 20581532 (-)
si:dkey-12j5.1 LOC106580016 coding upstream 12048 20927954 ~ 20968368 (-)
LOC110513019 LOC106580057 coding upstream 175881 21091787 ~ 21100107 (-)
LOC110513063 thbs3 coding upstream 196316 21112222 ~ 21133895 (-)
LOC110513075 NA coding upstream 220171 21135542 ~ 21152356 (-)
LOC110513123 LOC106580095 coding upstream 252234 21168140 ~ 21172480 (-)
G234013 NA non-coding downstream 84875 20823376 ~ 20829272 (-)
G233957 NA non-coding downstream 181812 20731978 ~ 20732335 (-)
G233955 NA non-coding downstream 184089 20729822 ~ 20730058 (-)
G233942 NA non-coding downstream 205140 20702205 ~ 20709007 (-)
G233917 NA non-coding downstream 257644 20656201 ~ 20656503 (-)
G234102 NA non-coding upstream 68259 20984165 ~ 20984574 (-)
G234166 NA non-coding upstream 172679 21088585 ~ 21091208 (-)
G234171 NA non-coding upstream 184873 21100779 ~ 21101316 (-)
G234173 NA non-coding upstream 186995 21102901 ~ 21103148 (-)
G234179 NA non-coding upstream 195033 21110939 ~ 21111461 (-)
G233513 LOC106561082 other downstream 362150 20551783 ~ 20551997 (-)
G233052 LOC106605397 other downstream 1157529 19756204 ~ 19757908 (-)
G232980 NA other downstream 1265518 19648086 ~ 19648629 (-)
rims2a LOC106579570 other downstream 1315046 19416054 ~ 19652601 (-)
G234224 LOC106605437 other upstream 262691 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 529582 21438546 ~ 21455972 (-)
G234600 NA other upstream 553755 21469661 ~ 21469945 (-)
G234621 NA other upstream 582502 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 822939 21738845 ~ 21743411 (-)

Expression


Co-expression Network