G234166


Basic Information

Item Value
gene id G234166
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21088585 ~ 21091208 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267661
CTTCATATTACATACTCTGAATTATTAGAAGTGAAGTAAATTGAAATTAAGTTTGAACCTTACTCTCTTATTGCTCTATTCCATCAGATCCACTTTAGCCGACATCTGCATAGAggttgttttggcggtgtcggaggtgaactgcgttagagctgtcaaatccacaagggctcctggcattatacctccatcggacattgccattggctgcacagcgtcgcattaagagaaatcccatgtagccttgtttacaagttcgaacactagaatgtgagatgtaatcttcacctcgattaggctgatagaaatcaTCATGATTTAGTTTAATGATTTTCAATTAGAGCGtcatttctatatagcctacactttcttaTTCTGAACTTCTAACGCCAGTGGGACGGTGTGGCTTCATGACAGtgatcaagagcagctgctcaccgatttgactGCTCTAATGCAGCTACACCTCCGACACTGCCAAAACATCAGCCATTTTTCTACCCAAGCCTTTTTTCACTTTAGTGGATAAGTTTATATCTTTTTGGGGGGAGCGGTGGGAGTCCAATAATACATAAAGCATTCCTCCAGAGAGATAGAACACACAAGTCCTTCCTAACCTTATGCATTATTGCTGGGCATCGAATATACAAAATATTGTTTACTGGCTTCGCACCCCAGAAACTGACTTGTGTCAAACAGAAGTCAACTCCTATTTCTCTTCTTCTTTGTCAGCTTTAGTCACCTCCAATCTTACTATTTCAGCTTCGCGCTACACATCCAATCCAATTGTTGTCAATATTCTTAAAATTTGGCCTTAATTCCGTCAACACTTTAAATTCTGTGAATTCTCTAAGTTCCTATATGTAATAATCACCTCTTCCTTTCAGCCAAACCAGCCAAACTGGATTCAGCTTGAAGTCTGTGGCAGAGGAATGGCCTTACTAAGTTTAATGGCCTTTATATTGATGGCACCTTTACATTTGATAGCGAGGTCATCAACATTGGCAATCTACCCCATTCAAGTGTATTTAGGTATTTCCAAATGTAGGTATTTTTGAGATAATCATGTCCTTTGATAACCCATCACTTAATAAAATTAGATCTGAGCAGGAAAAGGAACTTGGTTGAGAGACCTCGAACGAAGTCTGGAATAGTGCCTTGCTTAGGGTAAATGGAAGCTCCTCTTGTGCCCGGCTCAGCTTTATACTTCACTGTATCCATTTCAGTAAGGCCAGGCTCTCCAAATTCAACCCAAATATTGATGGTACATGTGACAGGTGTAAAAGCTCTTTGGCACACTTGACTCACATAATCTGGTTTTGTCCCTGTCTGGCAGACTACTGGTTCACTATATTTAAAACACTTTCTGAAGCATTTGATATAGAGTGGCAGCCTAGTGCAGAAATGGCTATTTTTACCAAACAACAATCCTTCCCTGACCAATAGACTGCTAGATGCCATTGCCTCCCTGTTGGCACACAGAAGGATTCTATTGGATTGGAAATCTATCAACCCTCCCTCAGCCTCTCTTTGGCCCAACTCATTTTCCTAAAATTAGACAAAATTAAGTAGACCTTTCAAGATTCAACCAACTAATTTTATTCCAGCTGGGACCTAATGATATCCTATTAGTATTCTTGTCCCCACCTCCAGCCCTTAAGGTTACTGCTACATAGGCCTATAGCATCACCTTCCTCCAGATTAGTATTCTTGGCCCCACCTCCAGCCCTTAAGGTTACTGCTACATAGGCCTATAGCATCACCTTCCTCAAGATCAGTATTCTTGGCCCCACCTCCAGCCCTTAAGGTTACTGCTACATAGGCCTATAAAATTAGTACTCTTGGCCTCCCCGCCAGCCCTTGAGGTTACTGCTACATAGACCTAGAAGATCACCTAATCACTTGAAACTGTTAGGCTATTACATTTTTGCTTTGTACTGAAGTAATATTATGTTGTATACTTTAGTGTTGTGTTTTCTGAGATGTAACTCAATGACTTTCCCTTtctttttaaatgtgtttggaaTCATTCTGGGTTTGTCGGCTAGTTATGGGGTGTCAGCTAGCGCCTATTAACAATTGGTTTGATTGAATCTAGTCCTAAACCTCTCACATTGGATGCTAATGTTAATGTAGTTCCTTTTGTATTTAGCCCAGTCCCACGTTCTCTTTTCTAAACAGTTGGACCCATTATAAACACTTCTCTCTTtcaatacttacagtgccttcggaaggtattcagaccccttgactatttccacatttagttatgtcacagccttattcaaaaatatCTTCAAttgtttcccccctcatcaatctacacacaataccccatgatgacaaagcaaaaacagatttggtCATTTTTGCAAAGATTTTTGGAAATatgacatttccataagtattcagaccctttactctgtactcagtactttgtcgaagcacctttggcagcgatcgagggaaagatgaacagagcaaagtgcagagagatccttgatgaaaacctgcttcagggcgcttaggacctcagactgagttaagggtcggaatacttattaca

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267661 True 2566 lncRNA 0.41 2 21088585 21091208

Neighbor

gene id symbol gene type direction distance location
si:dkey-12j5.1 LOC106580016 coding downstream 120217 20927954 ~ 20968368 (-)
glipr2l LOC106605424 coding downstream 436533 20648378 ~ 20652052 (-)
LOC110512925 NA coding downstream 493030 20590446 ~ 20595555 (-)
trnat-ugu-32 NA coding downstream 496457 20592056 ~ 20592128 (-)
trnat-ugu-31 NA coding downstream 505233 20583280 ~ 20583352 (-)
LOC110513019 LOC106580057 coding upstream 579 21091787 ~ 21100107 (-)
LOC110513063 thbs3 coding upstream 21014 21112222 ~ 21133895 (-)
LOC110513075 NA coding upstream 44869 21135542 ~ 21152356 (-)
LOC110513123 LOC106580095 coding upstream 76932 21168140 ~ 21172480 (-)
LOC110513176 LOC106605439 coding upstream 107557 21198765 ~ 21230066 (-)
G234102 NA non-coding downstream 104011 20984165 ~ 20984574 (-)
G234069 NA non-coding downstream 172679 20914147 ~ 20915906 (-)
G234013 NA non-coding downstream 259313 20823376 ~ 20829272 (-)
G233957 NA non-coding downstream 356250 20731978 ~ 20732335 (-)
G233955 NA non-coding downstream 358527 20729822 ~ 20730058 (-)
G234171 NA non-coding upstream 9571 21100779 ~ 21101316 (-)
G234173 NA non-coding upstream 11693 21102901 ~ 21103148 (-)
G234179 NA non-coding upstream 19731 21110939 ~ 21111461 (-)
G234187 NA non-coding upstream 35918 21127126 ~ 21127334 (-)
G233513 LOC106561082 other downstream 536588 20551783 ~ 20551997 (-)
G233052 LOC106605397 other downstream 1331967 19756204 ~ 19757908 (-)
G232980 NA other downstream 1439956 19648086 ~ 19648629 (-)
rims2a LOC106579570 other downstream 1489484 19416054 ~ 19652601 (-)
G234224 LOC106605437 other upstream 87389 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 354280 21438546 ~ 21455972 (-)
G234600 NA other upstream 378453 21469661 ~ 21469945 (-)
G234621 NA other upstream 407200 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 647637 21738845 ~ 21743411 (-)

Expression


Co-expression Network