G234179


Basic Information

Item Value
gene id G234179
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21110939 ~ 21111461 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267674
CTTCcacattctaaaatgtattgtcaaaagtattataataaaaaaatatatattgtgatACATAACAGGTGCATAATTTCGTTTGGGGAAAGGTTTGGACTTTGGAGGAGTGTGTCCAAACACACACTGTCTAAGCCCTTATAAACAAGTACACTAACTAAGATAAACATTTAGACCAATGAAAATGTGTTTAAAACCTTACCTCAAGTCACAAGTGATTCATTGCCTCTTCATTCATATAGTGTCGCCATTCTCTTGAATATGTTTGATATGGCTTATGAAAATGCATCATCAACAATTCGCCAGGCAGTTAGAAATATGGGTTCTTATTAGTCCAGAATTCCTTATATGCTGGATCTGTTTTCTTAAATGCATTCCGAACCCATTCTGCAATTATCCATAGCCGAAGATACAGGACTTCTTTCCTCTCCTAAAAGCTCTCTGACAATGGACCTCGCGCTCCGAATAGCCACTGCTTGGTCAATGGACCCCGCCTCCACTGCTACAACAAACAAAGGCCACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267674 True 523 lncRNA 0.38 1 21110939 21111461

Neighbor

gene id symbol gene type direction distance location
LOC110513019 LOC106580057 coding downstream 10832 21091787 ~ 21100107 (-)
si:dkey-12j5.1 LOC106580016 coding downstream 142571 20927954 ~ 20968368 (-)
glipr2l LOC106605424 coding downstream 458887 20648378 ~ 20652052 (-)
LOC110512925 NA coding downstream 515384 20590446 ~ 20595555 (-)
LOC110513063 thbs3 coding upstream 761 21112222 ~ 21133895 (-)
LOC110513075 NA coding upstream 24616 21135542 ~ 21152356 (-)
LOC110513123 LOC106580095 coding upstream 56679 21168140 ~ 21172480 (-)
LOC110513176 LOC106605439 coding upstream 87304 21198765 ~ 21230066 (-)
dcst1 dcst1 coding upstream 119208 21230669 ~ 21239790 (-)
G234173 NA non-coding downstream 7791 21102901 ~ 21103148 (-)
G234171 NA non-coding downstream 9623 21100779 ~ 21101316 (-)
G234166 NA non-coding downstream 19731 21088585 ~ 21091208 (-)
G234102 NA non-coding downstream 126365 20984165 ~ 20984574 (-)
G234069 NA non-coding downstream 195033 20914147 ~ 20915906 (-)
G234187 NA non-coding upstream 15665 21127126 ~ 21127334 (-)
G234223 NA non-coding upstream 63220 21174681 ~ 21175325 (-)
G233513 LOC106561082 other downstream 558942 20551783 ~ 20551997 (-)
G233052 LOC106605397 other downstream 1354321 19756204 ~ 19757908 (-)
G232980 NA other downstream 1462310 19648086 ~ 19648629 (-)
rims2a LOC106579570 other downstream 1511838 19416054 ~ 19652601 (-)
G234224 LOC106605437 other upstream 67136 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 334027 21438546 ~ 21455972 (-)
G234600 NA other upstream 358200 21469661 ~ 21469945 (-)
G234621 NA other upstream 386947 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 627384 21738845 ~ 21743411 (-)

Expression


Co-expression Network