G233840


Basic Information

Item Value
gene id G233840
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21132313 ~ 21132544 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267284
gtgttggtcccatgtttcatgagctgaaataaaagatcccatgaATGTACCATGCACACAAAAAAGTGTCTTTCTCTCAGATGTTTTGAGCACatttgcttacatccctgttagtgagcatttctcctttgccaagataatccattcacttgacaggtgtggcatatcaagaagctgattaaacagcatgatcattacacaggtgtaccttgtgctggaggacaataaaagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267284 True 232 lncRNA 0.42 1 21132313 21132544

Neighbor

gene id symbol gene type direction distance location
itga8 LOC106580029 coding upstream 41021 21026137 ~ 21091292 (+)
mindy3 LOC106580009 coding upstream 109956 20968444 ~ 21022357 (+)
LOC118946512 LOC106579994 coding upstream 220900 20846997 ~ 20911413 (+)
LOC110503853 LOC106579991 coding upstream 348997 20758809 ~ 20783316 (+)
LOC118936416 steap4 coding upstream 373513 20718857 ~ 20758800 (+)
LOC110513109 muc1 coding downstream 24632 21157176 ~ 21164038 (+)
LOC118946533 NA coding downstream 34006 21166550 ~ 21169783 (+)
dcst2 dcst2 coding downstream 107491 21240035 ~ 21263153 (+)
LOC110513224 LOC106580132 coding downstream 132874 21265418 ~ 21269804 (+)
trim33l LOC106580136 coding downstream 137972 21270516 ~ 21281833 (+)
G233830 NA non-coding upstream 21053 21111039 ~ 21111260 (+)
G233824 NA non-coding upstream 24624 21107485 ~ 21107689 (+)
G233820 NA non-coding upstream 32135 21096997 ~ 21100178 (+)
G233753 LOC106580016 non-coding upstream 168158 20963756 ~ 20964155 (+)
G233754 NA non-coding upstream 199586 20927898 ~ 20932727 (+)
G233869 NA non-coding downstream 35081 21167625 ~ 21167864 (+)
G234215 NA non-coding downstream 41875 21174419 ~ 21174623 (+)
G234217 NA non-coding downstream 43857 21176401 ~ 21176696 (+)
G234229 LOC106580111 non-coding downstream 81845 21214389 ~ 21215691 (+)
G233545 NA other upstream 523588 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 566601 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1287661 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 1898018 19226366 ~ 19234295 (+)
G231438 NA other upstream 2280331 18851249 ~ 18851982 (+)
G234322 dcst2 other downstream 131531 21264075 ~ 21264506 (+)
G234340 LOC106580151 other downstream 154182 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 885050 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 925998 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 1171949 22303641 ~ 22304906 (+)

Expression


Co-expression Network