G234223


Basic Information

Item Value
gene id G234223
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21174681 ~ 21175325 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267727
gaaccactcctttattgggggtgtcttgctaattgcctttaatttccacctgttgtccatTCTATTTGCATaacagcatgtgcaatttattgtcaatcagtgttgcttcctaagtggacagtttgatttcacagaagtgtgattgacttggagttacattgtgttgtttaagtgttcccctAATTTTTTTgtgcagtgtatatatatattttttaaaatcggacactacagatgattttgtgagaagactgattttcgggatgtctcatggtctgacaaacactacTCTAGCTCTGTCACTTTTGGTTGCAGATGTGGAAGAGCGACATATGGTGGATTGAGAAACACTATGCTAAAATTGTGCTGTTTACTTGCGTgaatgtattatttttatttaactaggcaagtcagttaagaacaaattcttatttacaatgacggcctaccccagccaaacccggatgacgctggttCAATTACAGCccgatgtgatacagcctggtttcaaaccagggactgtagtgatgcctcttgcactgagatgcagtgccttagaccgctgcaccactcaggagctgaacataaataaaataaaatacatctcATTCTTCCATACATTAGATCTTACATATCTTACATTGTTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267727 True 645 lncRNA 0.39 1 21174681 21175325

Neighbor

gene id symbol gene type direction distance location
LOC110513123 LOC106580095 coding downstream 2201 21168140 ~ 21172480 (-)
LOC110513075 NA coding downstream 22325 21135542 ~ 21152356 (-)
LOC110513063 thbs3 coding downstream 40786 21112222 ~ 21133895 (-)
LOC110513019 LOC106580057 coding downstream 74574 21091787 ~ 21100107 (-)
si:dkey-12j5.1 LOC106580016 coding downstream 206313 20927954 ~ 20968368 (-)
LOC110513176 LOC106605439 coding upstream 23440 21198765 ~ 21230066 (-)
dcst1 dcst1 coding upstream 55344 21230669 ~ 21239790 (-)
LOC110513266 LOC106580174 coding upstream 133519 21308844 ~ 21320007 (-)
LOC110503878 LOC106605446 coding upstream 144867 21320192 ~ 21331512 (-)
LOC110513307 polr3gl coding upstream 200499 21375824 ~ 21388805 (-)
G234187 NA non-coding downstream 47347 21127126 ~ 21127334 (-)
G234179 NA non-coding downstream 63220 21110939 ~ 21111461 (-)
G234173 NA non-coding downstream 71533 21102901 ~ 21103148 (-)
G234313 NA non-coding upstream 83581 21258906 ~ 21259200 (-)
G234332 NA non-coding upstream 94526 21269851 ~ 21270146 (-)
G234378 NA non-coding upstream 117550 21292875 ~ 21293076 (-)
glipr2l LOC106605424 other downstream 522985 20648378 ~ 20652052 (-)
G233513 LOC106561082 other downstream 622684 20551783 ~ 20551997 (-)
G233052 LOC106605397 other downstream 1418063 19756204 ~ 19757908 (-)
G232980 NA other downstream 1526052 19648086 ~ 19648629 (-)
rims2a LOC106579570 other downstream 1575580 19416054 ~ 19652601 (-)
G234224 LOC106605437 other upstream 3272 21178597 ~ 21180682 (-)
LOC110513321 LOC106580205 other upstream 270163 21438546 ~ 21455972 (-)
G234600 NA other upstream 294336 21469661 ~ 21469945 (-)
G234621 NA other upstream 323083 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 563520 21738845 ~ 21743411 (-)

Expression


Co-expression Network