Gene
RNA
| Item | Value |
|---|---|
| gene id | G234217 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 21176401 ~ 21176696 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267721 | True | 296 | lncRNA | 0.39 | 1 | 21176401 | 21176696 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118946533 | NA | coding | upstream | 7111 | 21166550 ~ 21169783 (+) |
| LOC110513109 | muc1 | coding | upstream | 12363 | 21157176 ~ 21164038 (+) |
| itga8 | LOC106580029 | coding | upstream | 85109 | 21026137 ~ 21091292 (+) |
| mindy3 | LOC106580009 | coding | upstream | 154044 | 20968444 ~ 21022357 (+) |
| LOC118946512 | LOC106579994 | coding | upstream | 264988 | 20846997 ~ 20911413 (+) |
| dcst2 | dcst2 | coding | downstream | 63339 | 21240035 ~ 21263153 (+) |
| LOC110513224 | LOC106580132 | coding | downstream | 88722 | 21265418 ~ 21269804 (+) |
| trim33l | LOC106580136 | coding | downstream | 93820 | 21270516 ~ 21281833 (+) |
| zgc:171704 | LOC106580162 | coding | downstream | 106801 | 21283497 ~ 21285741 (+) |
| LOC110513274 | LOC106580182 | coding | downstream | 180749 | 21357445 ~ 21360824 (+) |
| G234215 | NA | non-coding | upstream | 1778 | 21174419 ~ 21174623 (+) |
| G233869 | NA | non-coding | upstream | 8537 | 21167625 ~ 21167864 (+) |
| G233840 | NA | non-coding | upstream | 43857 | 21132313 ~ 21132544 (+) |
| G233830 | NA | non-coding | upstream | 65141 | 21111039 ~ 21111260 (+) |
| G234229 | LOC106580111 | non-coding | downstream | 37693 | 21214389 ~ 21215691 (+) |
| G234253 | NA | non-coding | downstream | 55477 | 21232173 ~ 21233859 (+) |
| G234299 | NA | non-coding | downstream | 70667 | 21247363 ~ 21247655 (+) |
| G234308 | NA | non-coding | downstream | 78972 | 21255668 ~ 21255937 (+) |
| G234317 | NA | non-coding | downstream | 84109 | 21260805 ~ 21261226 (+) |
| G233545 | NA | other | upstream | 567676 | 20608293 ~ 20608725 (+) |
| G233521 | LOC106579937 | other | upstream | 610689 | 20558776 ~ 20565712 (+) |
| LOC110512505 | LOC106579702 | other | upstream | 1331749 | 19821356 ~ 19844652 (+) |
| G231983 | LOC106597055 | other | upstream | 1942106 | 19226366 ~ 19234295 (+) |
| G231438 | NA | other | upstream | 2324419 | 18851249 ~ 18851982 (+) |
| G234322 | dcst2 | other | downstream | 87379 | 21264075 ~ 21264506 (+) |
| G234340 | LOC106580151 | other | downstream | 110030 | 21286726 ~ 21287002 (+) |
| kiaa0319 | LOC106580477 | other | downstream | 840898 | 22017579 ~ 22037490 (+) |
| LOC110503910 | LOC106580557 | other | downstream | 881846 | 22057484 ~ 22068080 (+) |
| G235426 | LOC106581355 | other | downstream | 1127797 | 22303641 ~ 22304906 (+) |
