G234322 (dcst2)


Basic Information

Item Value
gene id G234322
gene name dcst2
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21264075 ~ 21264506 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267841
GCCCTAACTTCCCCCCACATCACCCACAGGGGCACCAGGAgactgatgaagaggaggatctCCATGGCAACCCGGCGGCGGCCCTCAGAGAGCAGGGTGCAGCGTGGGGCCTACAGCAGTATAGGGCTGGTGGAAGGAGACAGTGGGGACAGTAGTGGTCATATCAGTCCCCCCAGTGATTCTGAACACAGTGAGCCAGATATGATTTACCAAGACTACTCAGAACAGGACCACTCTGAGCCTAGTGACGATGACTATAACCACAACCCCAACCCAACATTGTCCCTCTCGGCCATCTATGTGAGCAGGGGGCTGG

Function

symbol description
dcst2 Predicted to be located in membrane. Predicted to be integral component of membrane. Orthologous to human DCST2 (DC-STAMP domain containing 2).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267841 True 316 TUCP 0.32 2 21264075 21264506

Neighbor

gene id symbol gene type direction distance location
dcst2 dcst2 coding upstream 922 21240035 ~ 21263153 (+)
LOC118946533 NA coding upstream 94785 21166550 ~ 21169783 (+)
LOC110513109 muc1 coding upstream 100037 21157176 ~ 21164038 (+)
itga8 LOC106580029 coding upstream 172783 21026137 ~ 21091292 (+)
mindy3 LOC106580009 coding upstream 241718 20968444 ~ 21022357 (+)
LOC110513224 LOC106580132 coding downstream 912 21265418 ~ 21269804 (+)
trim33l LOC106580136 coding downstream 6010 21270516 ~ 21281833 (+)
zgc:171704 LOC106580162 coding downstream 18991 21283497 ~ 21285741 (+)
LOC110513274 LOC106580182 coding downstream 92939 21357445 ~ 21360824 (+)
LOC110513285 LOC106580187 coding downstream 125911 21390417 ~ 21407197 (+)
G234317 NA non-coding upstream 2849 21260805 ~ 21261226 (+)
G234308 NA non-coding upstream 8138 21255668 ~ 21255937 (+)
G234299 NA non-coding upstream 16420 21247363 ~ 21247655 (+)
G234253 NA non-coding upstream 30216 21232173 ~ 21233859 (+)
G234344 NA non-coding downstream 28882 21293388 ~ 21293794 (+)
G234345 NA non-coding downstream 29525 21294031 ~ 21294393 (+)
G234353 NA non-coding downstream 39815 21304321 ~ 21304548 (+)
G234355 LOC106580174 non-coding downstream 44338 21308844 ~ 21312450 (+)
G234360 NA non-coding downstream 55715 21320221 ~ 21322885 (+)
G233545 NA other upstream 655350 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 698363 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1419423 19821356 ~ 19844652 (+)
G231983 LOC106597055 other upstream 2029780 19226366 ~ 19234295 (+)
G231438 NA other upstream 2412093 18851249 ~ 18851982 (+)
G234340 LOC106580151 other downstream 22220 21286726 ~ 21287002 (+)
kiaa0319 LOC106580477 other downstream 753088 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 794036 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 1039987 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 1196034 22460524 ~ 22472917 (+)

Expression


Co-expression Network