Gene
RNA
| Item | Value |
|---|---|
| gene id | G234340 |
| gene name | LOC106580151 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 21286726 ~ 21287002 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: mediator of DNA damage checkpoint protein 1-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU267870 | True | 277 | TUCP | 0.38 | 1 | 21286726 | 21287002 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| zgc:171704 | LOC106580162 | coding | upstream | 985 | 21283497 ~ 21285741 (+) |
| trim33l | LOC106580136 | coding | upstream | 4893 | 21270516 ~ 21281833 (+) |
| LOC110513224 | LOC106580132 | coding | upstream | 16922 | 21265418 ~ 21269804 (+) |
| dcst2 | dcst2 | coding | upstream | 23573 | 21240035 ~ 21263153 (+) |
| LOC118946533 | NA | coding | upstream | 117436 | 21166550 ~ 21169783 (+) |
| LOC110513274 | LOC106580182 | coding | downstream | 70443 | 21357445 ~ 21360824 (+) |
| LOC110513285 | LOC106580187 | coding | downstream | 103415 | 21390417 ~ 21407197 (+) |
| LOC110513388 | LOC106580236 | coding | downstream | 185942 | 21472944 ~ 21483516 (+) |
| LOC110513414 | gnrh-r | coding | downstream | 206157 | 21493159 ~ 21497274 (+) |
| LOC110513472 | creb3l4 | coding | downstream | 332723 | 21619725 ~ 21624474 (+) |
| G234317 | NA | non-coding | upstream | 25500 | 21260805 ~ 21261226 (+) |
| G234308 | NA | non-coding | upstream | 30789 | 21255668 ~ 21255937 (+) |
| G234299 | NA | non-coding | upstream | 39071 | 21247363 ~ 21247655 (+) |
| G234253 | NA | non-coding | upstream | 52867 | 21232173 ~ 21233859 (+) |
| G234344 | NA | non-coding | downstream | 6386 | 21293388 ~ 21293794 (+) |
| G234345 | NA | non-coding | downstream | 7029 | 21294031 ~ 21294393 (+) |
| G234353 | NA | non-coding | downstream | 17319 | 21304321 ~ 21304548 (+) |
| G234355 | LOC106580174 | non-coding | downstream | 21842 | 21308844 ~ 21312450 (+) |
| G234360 | NA | non-coding | downstream | 33219 | 21320221 ~ 21322885 (+) |
| G234322 | dcst2 | other | upstream | 22220 | 21264075 ~ 21264506 (+) |
| G233545 | NA | other | upstream | 678001 | 20608293 ~ 20608725 (+) |
| G233521 | LOC106579937 | other | upstream | 721014 | 20558776 ~ 20565712 (+) |
| LOC110512505 | LOC106579702 | other | upstream | 1442074 | 19821356 ~ 19844652 (+) |
| G231983 | LOC106597055 | other | upstream | 2052431 | 19226366 ~ 19234295 (+) |
| kiaa0319 | LOC106580477 | other | downstream | 730592 | 22017579 ~ 22037490 (+) |
| LOC110503910 | LOC106580557 | other | downstream | 771540 | 22057484 ~ 22068080 (+) |
| G235426 | LOC106581355 | other | downstream | 1017491 | 22303641 ~ 22304906 (+) |
| LOC110514034 | NA | other | downstream | 1173538 | 22460524 ~ 22472917 (+) |
| G235571 | NA | other | downstream | 1385734 | 22672736 ~ 22698834 (+) |
