G234353


Basic Information

Item Value
gene id G234353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21304321 ~ 21304548 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267883
agcatcctgtcgggctgtatcactgcctggtatggcaactgcaccgcccgcaaccacaaggctctccagagggtggtgcagtctgcacaacgcattactgggggcaaactacccgccctccaggacacctataacACCCGacgtcacaggaagaccaaaaagatcatcaaggacatcaatcacccgagctactgcctgttcaccccgccaaCATCCAGAAGGCAggct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267883 True 228 lncRNA 0.57 1 21304321 21304548

Neighbor

gene id symbol gene type direction distance location
zgc:171704 LOC106580162 coding upstream 18580 21283497 ~ 21285741 (+)
trim33l LOC106580136 coding upstream 22488 21270516 ~ 21281833 (+)
LOC110513224 LOC106580132 coding upstream 34517 21265418 ~ 21269804 (+)
dcst2 dcst2 coding upstream 41168 21240035 ~ 21263153 (+)
LOC118946533 NA coding upstream 135031 21166550 ~ 21169783 (+)
LOC110513274 LOC106580182 coding downstream 52897 21357445 ~ 21360824 (+)
LOC110513285 LOC106580187 coding downstream 85869 21390417 ~ 21407197 (+)
LOC110513388 LOC106580236 coding downstream 168396 21472944 ~ 21483516 (+)
LOC110513414 gnrh-r coding downstream 188611 21493159 ~ 21497274 (+)
LOC110513472 creb3l4 coding downstream 315177 21619725 ~ 21624474 (+)
G234345 NA non-coding upstream 9928 21294031 ~ 21294393 (+)
G234344 NA non-coding upstream 10527 21293388 ~ 21293794 (+)
G234317 NA non-coding upstream 43095 21260805 ~ 21261226 (+)
G234308 NA non-coding upstream 48384 21255668 ~ 21255937 (+)
G234355 LOC106580174 non-coding downstream 4296 21308844 ~ 21312450 (+)
G234360 NA non-coding downstream 15673 21320221 ~ 21322885 (+)
G234361 NA non-coding downstream 18470 21323018 ~ 21323318 (+)
G234362 NA non-coding downstream 19653 21324201 ~ 21324431 (+)
G234370 NA non-coding downstream 31798 21336346 ~ 21336639 (+)
G234340 LOC106580151 other upstream 17319 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 39815 21264075 ~ 21264506 (+)
G233545 NA other upstream 695596 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 738609 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1459669 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 713046 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 753994 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 999945 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 1155992 22460524 ~ 22472917 (+)
G235571 NA other downstream 1368188 22672736 ~ 22698834 (+)

Expression


Co-expression Network