G234361


Basic Information

Item Value
gene id G234361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21323018 ~ 21323318 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267893
TCCCCCCACACTGCCAGGCCCTGGGATGTTGCCTGCCACTGCTGCAGCCTGTGCTGCTGCTGCAGCCTGGGCCGTGGCTGCCTGCTGCTGCATCTGCCTGTGGCACTGACGCAGGTCAAACACCTTCATGTAGGCCCCAGGGTAGATCTTGTGAACTGCGTCTCCCGGGGCTCGCCCCGCCTCCCGGTCCAGGTAGTAGCTCTGTACGAACACTGCATGGTCGCTAAGGCAACGCATCCACACATCCCCCTCACCACGACACTCCAACTGCACCCCCTTCCCAATGTGCAACCTGTGAAAT

Function

NR:

description
Smad4b, partial

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU267893 True 301 lncRNA 0.38 1 21323018 21323318

Neighbor

gene id symbol gene type direction distance location
zgc:171704 LOC106580162 coding upstream 37277 21283497 ~ 21285741 (+)
trim33l LOC106580136 coding upstream 41185 21270516 ~ 21281833 (+)
LOC110513224 LOC106580132 coding upstream 53214 21265418 ~ 21269804 (+)
dcst2 dcst2 coding upstream 59865 21240035 ~ 21263153 (+)
LOC118946533 NA coding upstream 153728 21166550 ~ 21169783 (+)
LOC110513274 LOC106580182 coding downstream 34127 21357445 ~ 21360824 (+)
LOC110513285 LOC106580187 coding downstream 67099 21390417 ~ 21407197 (+)
LOC110513388 LOC106580236 coding downstream 149626 21472944 ~ 21483516 (+)
LOC110513414 gnrh-r coding downstream 169841 21493159 ~ 21497274 (+)
LOC110513472 creb3l4 coding downstream 296407 21619725 ~ 21624474 (+)
G234360 NA non-coding upstream 133 21320221 ~ 21322885 (+)
G234355 LOC106580174 non-coding upstream 10568 21308844 ~ 21312450 (+)
G234353 NA non-coding upstream 18470 21304321 ~ 21304548 (+)
G234345 NA non-coding upstream 28625 21294031 ~ 21294393 (+)
G234344 NA non-coding upstream 29224 21293388 ~ 21293794 (+)
G234362 NA non-coding downstream 883 21324201 ~ 21324431 (+)
G234370 NA non-coding downstream 13028 21336346 ~ 21336639 (+)
G234369 NA non-coding downstream 13361 21336679 ~ 21337125 (+)
G234400 NA non-coding downstream 15002 21338320 ~ 21338525 (+)
G234420 NA non-coding downstream 38987 21362305 ~ 21362594 (+)
G234340 LOC106580151 other upstream 36016 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 58512 21264075 ~ 21264506 (+)
G233545 NA other upstream 714293 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 757306 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1478366 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 694276 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 735224 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 981175 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 1137222 22460524 ~ 22472917 (+)
G235571 NA other downstream 1349418 22672736 ~ 22698834 (+)

Expression


Co-expression Network