G234400


Basic Information

Item Value
gene id G234400
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21338320 ~ 21338525 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267932
ggattgaggtcagagctttgtgatggccactccaatagcttgtaGCTATTTTAtatactttgttgtccttaagccattttgccacaactttggaagtatgcttggggtcattgtccatttggaagacccatttgcgaccaagccttaACTGACTGgttttgagatgtttcttcaatatatccacataattttcctaccatctattt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267932 True 206 lncRNA 0.36 1 21338320 21338525

Neighbor

gene id symbol gene type direction distance location
zgc:171704 LOC106580162 coding upstream 52579 21283497 ~ 21285741 (+)
trim33l LOC106580136 coding upstream 56487 21270516 ~ 21281833 (+)
LOC110513224 LOC106580132 coding upstream 68516 21265418 ~ 21269804 (+)
dcst2 dcst2 coding upstream 75167 21240035 ~ 21263153 (+)
LOC118946533 NA coding upstream 169030 21166550 ~ 21169783 (+)
LOC110513274 LOC106580182 coding downstream 18920 21357445 ~ 21360824 (+)
LOC110513285 LOC106580187 coding downstream 51892 21390417 ~ 21407197 (+)
LOC110513388 LOC106580236 coding downstream 134419 21472944 ~ 21483516 (+)
LOC110513414 gnrh-r coding downstream 154634 21493159 ~ 21497274 (+)
LOC110513472 creb3l4 coding downstream 281200 21619725 ~ 21624474 (+)
G234369 NA non-coding upstream 1195 21336679 ~ 21337125 (+)
G234370 NA non-coding upstream 1681 21336346 ~ 21336639 (+)
G234362 NA non-coding upstream 13889 21324201 ~ 21324431 (+)
G234361 NA non-coding upstream 15002 21323018 ~ 21323318 (+)
G234360 NA non-coding upstream 15435 21320221 ~ 21322885 (+)
G234420 NA non-coding downstream 23780 21362305 ~ 21362594 (+)
G234422 NA non-coding downstream 24868 21363393 ~ 21363737 (+)
G234439 NA non-coding downstream 49468 21387993 ~ 21388289 (+)
G234463 NA non-coding downstream 88533 21427058 ~ 21427330 (+)
G234468 NA non-coding downstream 96768 21435293 ~ 21440035 (+)
G234340 LOC106580151 other upstream 51318 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 73814 21264075 ~ 21264506 (+)
G233545 NA other upstream 729595 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 772608 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1493668 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 679069 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 720017 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 965968 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 1122015 22460524 ~ 22472917 (+)
G235571 NA other downstream 1334211 22672736 ~ 22698834 (+)

Expression


Co-expression Network