G234420


Basic Information

Item Value
gene id G234420
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21362305 ~ 21362594 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU267952
gacctgcagagagctgggaccaaagtaacaaagcctaccatcagtaacacactacgccgccagggactcaaatcctgcagtgccagacgtgtccccctgcttaagccagtacatgtccaggcccgtctgaagtttgctagagagcatttggatgatccagaagaaaattgggagaatgacatatggtcagatgaaaccaaaataggacttttggtaaaaactcaactcgccgtgtttggaggacaaagaatgctgagttgcatccaaagaacaccatacctactgtgaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU267952 True 290 lncRNA 0.38 1 21362305 21362594

Neighbor

gene id symbol gene type direction distance location
LOC110513274 LOC106580182 coding upstream 1481 21357445 ~ 21360824 (+)
zgc:171704 LOC106580162 coding upstream 76564 21283497 ~ 21285741 (+)
trim33l LOC106580136 coding upstream 80472 21270516 ~ 21281833 (+)
LOC110513224 LOC106580132 coding upstream 92501 21265418 ~ 21269804 (+)
dcst2 dcst2 coding upstream 99152 21240035 ~ 21263153 (+)
LOC110513285 LOC106580187 coding downstream 27823 21390417 ~ 21407197 (+)
LOC110513388 LOC106580236 coding downstream 110350 21472944 ~ 21483516 (+)
LOC110513414 gnrh-r coding downstream 130565 21493159 ~ 21497274 (+)
LOC110513472 creb3l4 coding downstream 257131 21619725 ~ 21624474 (+)
LOC110513504 LOC106580325 coding downstream 269746 21632340 ~ 21643258 (+)
G234400 NA non-coding upstream 23780 21338320 ~ 21338525 (+)
G234369 NA non-coding upstream 25180 21336679 ~ 21337125 (+)
G234370 NA non-coding upstream 25666 21336346 ~ 21336639 (+)
G234362 NA non-coding upstream 37874 21324201 ~ 21324431 (+)
G234361 NA non-coding upstream 38987 21323018 ~ 21323318 (+)
G234422 NA non-coding downstream 799 21363393 ~ 21363737 (+)
G234439 NA non-coding downstream 25399 21387993 ~ 21388289 (+)
G234463 NA non-coding downstream 64464 21427058 ~ 21427330 (+)
G234468 NA non-coding downstream 72699 21435293 ~ 21440035 (+)
G234480 NA non-coding downstream 95242 21457836 ~ 21459196 (+)
G234340 LOC106580151 other upstream 75303 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 97799 21264075 ~ 21264506 (+)
G233545 NA other upstream 753580 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 796593 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1517653 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 655000 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 695948 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 941899 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 1097946 22460524 ~ 22472917 (+)
G235571 NA other downstream 1310142 22672736 ~ 22698834 (+)

Expression


Co-expression Network