G234601


Basic Information

Item Value
gene id G234601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21471366 ~ 21472544 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU268160
ATGCTCAAGCGCGCACACACAttcgttctgactgtctgctcagactaacagcctcacctgttgttcctgtcaatcagacacgcAGTGTCAACCAAAGGGAGGGCCCACACTTTGCAGCTAAGGAGAgcagctgtgaaaacaacagctggaaaatgagGCAGAAGCACAGCATTTGGAAGCTTTTTAATAATGTAGACAACGTTAGATAGAGCACAGTGTAGGATTTGCCAAAACAAAACCACATATAAAGCCAGttgagagtggccagagaatggcaagtagatggaaaagtggtgtgtCTAACATAACCACAGCCATGAAAATGTTAAATGGAacccatcatccatgtcttgcccacacaatcaacctgatagtaagagatgctctgaaggtgatgaagcccactgtgaacaaagtgaaagcagctgtggaatacttccacaggagcacagtaggtgctgaaaaactaaagtagacacaacgccagatggggatgcctgagctgaggcctaaataagactgcactacaaggtggaattcaacattttatatgttgaagtggtttcttgagtcaaaggatgccatcatctctaccctggccattgtcaatgcacctgttgatgctctgacccaagaggaatgggaggtggaggaggtgtgcagtcctggaaccctttgagcaggtcactggGGAGATCAGTGGAGAGGGGTAAGCAGTTATTACTTcatcattatttaatccagtattatgtacagtgccttgcgaaagtattcggcccccttgaactttgcgaccttttgccacatttcaggcttcaaacataaagatataaaactgtatttttttgtgaagaatcaacaacaagtggaacacaatcatgaagtggaacgacatttattggatatttcaaacttttttaacaaatcaaaaactgaaaaattgggcgtgcaaaattattcagcccctttactttcagtgcagcaaactctctccagaagttcagtgaggatctctgaatgatccaatgttgacctaaatgactaatgatgataaatacaatccacctgtgtgtaatcaagtctccgtataaatgcacctgcactgtgatagtctcagaggtccgtcaaaagcgcagagagcatcatgaagaacaaggaacacaccaggcaggtccgaga

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268160 True 1179 lncRNA 0.44 1 21471366 21472544

Neighbor

gene id symbol gene type direction distance location
LOC110503879 LOC106605450 coding downstream 2139 21457830 ~ 21469227 (-)
LOC110513321 LOC106580205 coding downstream 15394 21438546 ~ 21455972 (-)
LOC118946634 NA coding downstream 51088 21416211 ~ 21420278 (-)
LOC110513307 polr3gl coding downstream 82561 21375824 ~ 21388805 (-)
LOC110503878 LOC106605446 coding downstream 139854 21320192 ~ 21331512 (-)
LOC110503882 LOC106580249 coding upstream 41994 21514538 ~ 21539187 (-)
LOC110513430 LOC106580258 coding upstream 78874 21551418 ~ 21587320 (-)
LOC110513449 LOC106580288 coding upstream 116397 21587450 ~ 21609130 (-)
LOC110513497 NA coding upstream 139610 21612154 ~ 21619661 (-)
LOC118944502 LOC106580547 coding upstream 244309 21716853 ~ 21718331 (-)
G234586 NA non-coding downstream 38077 21432988 ~ 21433289 (-)
G234584 NA non-coding downstream 40185 21430968 ~ 21431181 (-)
G234581 NA non-coding downstream 42992 21428109 ~ 21428374 (-)
G234550 NA non-coding downstream 96608 21374036 ~ 21374758 (-)
G234610 NA non-coding upstream 11840 21484384 ~ 21484597 (-)
G234613 NA non-coding upstream 15549 21488093 ~ 21488380 (-)
G234617 gnrh-r non-coding upstream 20680 21493224 ~ 21493785 (-)
G234619 gnrh-r non-coding upstream 24286 21496830 ~ 21497139 (-)
G234620 NA non-coding upstream 24924 21497468 ~ 21497764 (-)
G234600 NA other downstream 1421 21469661 ~ 21469945 (-)
G234224 LOC106605437 other downstream 290684 21178597 ~ 21180682 (-)
glipr2l LOC106605424 other downstream 819670 20648378 ~ 20652052 (-)
G233513 LOC106561082 other downstream 919369 20551783 ~ 20551997 (-)
G234621 NA other upstream 25864 21498408 ~ 21498832 (-)
G235092 LOC100194668 other upstream 266301 21738845 ~ 21743411 (-)
LOC118946878 NA other upstream 271907 21744425 ~ 21755710 (-)
G235881 NA other upstream 1101289 22573833 ~ 22574989 (-)
G237047 NA other upstream 1684565 23157109 ~ 23189031 (-)

Expression


Co-expression Network