G234500


Basic Information

Item Value
gene id G234500
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21501342 ~ 21501913 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU268038
ccaagacagccgtgaagagggcatgacaaaacctattccccctccggagactgaaaagatttgtaatGGGTCCCAAGATCCTCAAAAAAGtttgacagctgcaccatcgagagcatcctggcaggttgcatcaccgcctagtatggaaactgctcggcatccgaccgtaaggcgctacagagggtagtgcatacgacccagtacatcactggggccacgtttcctgccatccaggacctctatactaggcagtgtcagaggaaagccctaaaaattgtcaaagactccagtcacccaagtcatagactgctctttctgctaccgcacggcaagcggtaccggagtgccaagtctaggtccaaatggctccttaacagcttctacccccaagttataagactgctgaacaattaatcaaatggccacccggactattaacatcgaccccccccccccccctttgtttttacactgctgctactcgctgtttactatttatgcattgtcactttacccctacctacatgtacaaattacctcgactaacctgtacccccgcacattgactcggt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268038 True 572 lncRNA 0.50 1 21501342 21501913

Neighbor

gene id symbol gene type direction distance location
LOC110513414 gnrh-r coding upstream 4068 21493159 ~ 21497274 (+)
LOC110513388 LOC106580236 coding upstream 17826 21472944 ~ 21483516 (+)
LOC110513285 LOC106580187 coding upstream 94145 21390417 ~ 21407197 (+)
LOC110513274 LOC106580182 coding upstream 140518 21357445 ~ 21360824 (+)
zgc:171704 LOC106580162 coding upstream 215601 21283497 ~ 21285741 (+)
LOC110513472 creb3l4 coding downstream 117812 21619725 ~ 21624474 (+)
LOC110513504 LOC106580325 coding downstream 130427 21632340 ~ 21643258 (+)
LOC100136306 LOC106580330 coding downstream 147528 21649441 ~ 21713248 (+)
LOC110503897 LOC106571067 coding downstream 218332 21720245 ~ 21733022 (+)
pdia7 LOC106580339 coding downstream 231194 21733107 ~ 21737376 (+)
G234504 NA non-coding upstream 3440 21497532 ~ 21497902 (+)
G234497 NA non-coding upstream 15152 21485989 ~ 21486190 (+)
G234496 NA non-coding upstream 15449 21485664 ~ 21485893 (+)
G234491 NA non-coding upstream 31154 21469863 ~ 21470188 (+)
G234654 NA non-coding downstream 49508 21551421 ~ 21554541 (+)
G234677 NA non-coding downstream 85530 21587443 ~ 21587802 (+)
G234775 NA non-coding downstream 259224 21761137 ~ 21761338 (+)
G234799 NA non-coding downstream 301970 21803883 ~ 21804116 (+)
G234812 NA non-coding downstream 363880 21865793 ~ 21867110 (+)
G234340 LOC106580151 other upstream 214340 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 236836 21264075 ~ 21264506 (+)
G233545 NA other upstream 892617 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 935630 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 1656690 19821356 ~ 19844652 (+)
kiaa0319 LOC106580477 other downstream 515681 22017579 ~ 22037490 (+)
LOC110503910 LOC106580557 other downstream 556629 22057484 ~ 22068080 (+)
G235426 LOC106581355 other downstream 802580 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 958627 22460524 ~ 22472917 (+)
G235571 NA other downstream 1170823 22672736 ~ 22698834 (+)

Expression


Co-expression Network