G235052


Basic Information

Item Value
gene id G235052
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21632282 ~ 21632789 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU268681
CAAAGATCCACACACTAAAATCCAATATCTTATTGAAGCGCAGAGTATGCTCTGTCTGTTCTACTGATAGACAGAAAACCAAAATAAATCCACTTCTTGTTACGCTCACCTTCTCCAACGCATTCACGATTTTCAGACTTAAAATTAATCTCCCAGGTAACTCCATCAATTCAAAACCCTCACTCTCACCCAAAAAAATATAAGAACTAGGCTTAGATTTACCAACTTCAACTACCACTTTACTTCACTTATTTCCTTTCGTATTCGCCACTGATTTCaatccttctcatctccactcgACGCGCCATCTGATTCAAACAAAACATGTAGTTCCACCATCTTCCCATTAGTATTTTCCTGTTGACGGTGGCTTCGATATGTGGGCTTGGCTAAAGTGTGAGAGAGTTAGCATGCAGCAATGACTGGTCCACCATGAGAATGCTGGCACTTCCGTCTCCTTGTCGTTTCACTTAACGCCTCGTTTACAttacaaaaggcacatctcaat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268681 True 508 lncRNA 0.38 1 21632282 21632789

Neighbor

gene id symbol gene type direction distance location
LOC110513497 NA coding downstream 12621 21612154 ~ 21619661 (-)
LOC110513449 LOC106580288 coding downstream 23152 21587450 ~ 21609130 (-)
LOC110513430 LOC106580258 coding downstream 44962 21551418 ~ 21587320 (-)
LOC110503882 LOC106580249 coding downstream 93095 21514538 ~ 21539187 (-)
LOC110503879 LOC106605450 coding downstream 163055 21457830 ~ 21469227 (-)
LOC118944502 LOC106580547 coding upstream 84064 21716853 ~ 21718331 (-)
LOC118946878 NA coding upstream 111636 21744425 ~ 21755710 (-)
LOC110513558 LOC106580365 coding upstream 123868 21756657 ~ 21760819 (-)
pmvk pmvk coding upstream 251992 21884781 ~ 21891946 (-)
LOC110513756 LOC106580458 coding upstream 269684 21902473 ~ 21926314 (-)
G234623 NA non-coding downstream 131351 21500650 ~ 21500931 (-)
G234620 NA non-coding downstream 134518 21497468 ~ 21497764 (-)
G234619 gnrh-r non-coding downstream 135143 21496830 ~ 21497139 (-)
G234617 gnrh-r non-coding downstream 138497 21493224 ~ 21493785 (-)
G235145 NA non-coding upstream 155258 21788047 ~ 21789380 (-)
G235165 NA non-coding upstream 172741 21805530 ~ 21805751 (-)
G235157 NA non-coding upstream 250450 21883239 ~ 21919236 (-)
G235200 NA non-coding upstream 255302 21888091 ~ 21889440 (-)
G234621 NA other downstream 133450 21498408 ~ 21498832 (-)
G234600 NA other downstream 162337 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 176566 21438546 ~ 21455972 (-)
G234224 LOC106605437 other downstream 451600 21178597 ~ 21180682 (-)
glipr2l LOC106605424 other downstream 980586 20648378 ~ 20652052 (-)
G235092 LOC100194668 other upstream 106056 21738845 ~ 21743411 (-)
G235881 NA other upstream 941044 22573833 ~ 22574989 (-)
G237047 NA other upstream 1524320 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 2138735 23771511 ~ 23780158 (-)

Expression


Co-expression Network