G235092 (LOC100194668)


Basic Information

Item Value
gene id G235092
gene name LOC100194668
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21738845 ~ 21743411 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU268723
GTGAGCACGCGAATGGTGGAGGCTCCACAGTTTTGGATGAGTGTACGGGGGATAACCTCCAGGGCCTGGGCCACGGCACGGTAGGGCCACTGCTCCACCCCGGTCAGGGTCTTGGAACGCTCCATCAGCCTCTTGGACACAGCCATCTCCACCGCCCCGCCTCCAGGGAGTAGAGATGGGTCCAGTAGCACATTACGACACACCTGCATGGCATCCTGCAAGTTACGCTCCACCtcAGCCAGTATCTCTTTGCTGGCTCCTCTCAGCAGGATGGTGCAGGCTTTGGGGTCTTTGCACTCTGTGACGAAGGTGAAGTACTCATCTCCAATCTTCTTGATCTCAAACAGGCCGGCGCCGGTTCCCACGTCCTCCTCACGCAGCTCGTCTGTACGGCTGGCAATGCGAGCCCCACATGCCCTTGAAATGCGGTTGTTGTCAGTCTTTCTGACACGGCGGATGGCTGTGATGTTGGCCTTCATCAGATAGTGTTGTGCCAGGTCTGAGATGCCCTTCTCAGTGAAGATGAGGTCTGGCTTGAGGCGGATGATGTCTTCACAGATCGTCTGGATATACTCTTCCTCCATCTGAAGGATCCTGGAAAAGTCTTCCTCACGTGTGATCTCAATGTCAGTCTGGCTCTCGCCCTTCTTGTACTCCAGGGAGCAGTCCAGCAGGATGATGCGGGGGTTCTTGATCATTCTGCGCATGCGGGGGTGAGTGACGTCCTTGTTGACCATCACGCCTTTTAGCACACATGAGTCCTCAATGAAGCCACCAGGCACCTTCTCCACTTTGGCGTACAGCTTAATGTTGATTTCCTTGCGTCCGTGCTCCTCCAACTCCACAGTGCGCACGGCGTCCAGGGCAATATTACACGCCATGGTAGACCAACGACTCAAGGCCTTGGTGCAGATGGCAGAGTTGATGATCTTCAGCATCTGTGCCCTGTCATTCACATCCACCGGGGTGCTGATGTCTTTGAGCATGTCGAGCATGTCGTCCAGGGCGTGTCTGTAGGCACTAATGATGACTGTGGGGTGCATCTGCTGCTCCAAGAACTGCTCTGCTACAGACAGCATCTCTCCAGCGAGAATGATGACTGACGTGGTGCCGTCTCCCACCTCCTCATCCTGGGTGCGGCTGATCTCAATCATGGACTTGGCTGCCGGGTGCTGCACTTGGATCTCTCGGAGGATGGCATTGCCATCGTTGGTCATGACAATGCCGCCCATGGGGTCTAGCAGCATCTTCATCATGGCTCTTGGTCCCAGgcatgttctgatgacatctgCTATTGCCTTTGCGGCACTGATGTTCCCTTTCTGAACCTTGCGTCCAGACTCCCTTTTCATATTCTGGCTCAACACGACGATTGGTCTTCCCATCATTTTGGCAGCGTGCGTTG

Function

NR:

description
T-complex protein 1 subunit gamma-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268723 True 1405 TUCP 0.41 12 21738845 21743411

Neighbor

gene id symbol gene type direction distance location
LOC118944502 LOC106580547 coding downstream 20514 21716853 ~ 21718331 (-)
LOC110513497 NA coding downstream 119184 21612154 ~ 21619661 (-)
LOC110513449 LOC106580288 coding downstream 129715 21587450 ~ 21609130 (-)
LOC110513430 LOC106580258 coding downstream 151525 21551418 ~ 21587320 (-)
LOC110503882 LOC106580249 coding downstream 199658 21514538 ~ 21539187 (-)
LOC118946878 NA coding upstream 1014 21744425 ~ 21755710 (-)
LOC110513558 LOC106580365 coding upstream 13246 21756657 ~ 21760819 (-)
pmvk pmvk coding upstream 141370 21884781 ~ 21891946 (-)
LOC110513756 LOC106580458 coding upstream 159062 21902473 ~ 21926314 (-)
LOC110503903 LOC106605471 coding upstream 193771 21937182 ~ 21949846 (-)
G235052 NA non-coding downstream 106056 21632282 ~ 21632789 (-)
G234623 NA non-coding downstream 237914 21500650 ~ 21500931 (-)
G234620 NA non-coding downstream 241081 21497468 ~ 21497764 (-)
G234619 gnrh-r non-coding downstream 241706 21496830 ~ 21497139 (-)
G235145 NA non-coding upstream 44636 21788047 ~ 21789380 (-)
G235165 NA non-coding upstream 62119 21805530 ~ 21805751 (-)
G235157 NA non-coding upstream 139828 21883239 ~ 21919236 (-)
G235200 NA non-coding upstream 144680 21888091 ~ 21889440 (-)
G234621 NA other downstream 240013 21498408 ~ 21498832 (-)
G234600 NA other downstream 268900 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 283129 21438546 ~ 21455972 (-)
G234224 LOC106605437 other downstream 558163 21178597 ~ 21180682 (-)
glipr2l LOC106605424 other downstream 1087149 20648378 ~ 20652052 (-)
G235881 NA other upstream 830422 22573833 ~ 22574989 (-)
G237047 NA other upstream 1413698 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 2028113 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 2437145 24180556 ~ 24183964 (-)

Expression


Co-expression Network