G234812


Basic Information

Item Value
gene id G234812
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 21865793 ~ 21867110 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU268403
ATCTCTATGGGCGTCCTGCATTTCCAATTGTCTTAAGAATAATTGTACCCAAAGATCTTTGCGTCTTTCattgatttggtgttttattTGTGCAATGCTAATTCCAAGATGAAAGTTGGTCAAATGCTTTGAATAGTTTGTATTTCAGTTGTCCCTGCATTTCCCCACTCACTAGAATTTCAAATGCTTGGCCCTCAACAACTTGCCAAATTCCTCTAAGCTCACTAGTAGCTAGTGATGTAAGTGCCTGGGTTGCCACACAGTGCAACATTTATTGCGGTTTTATGGCGCACTACTTTGGCCCAGGCCCCAGTTGTAATTGTATGGTGTAATTCTGTGGTTAAATTCGAGGGTAACTTGGTCAAACGCAGATGATACAAAGCCGTATGGATTTCTCCTTTCATCTCATGATAAAACTCTTACAAGACATGAATGCTGTCACTGATATGCGCTCAGCATCTTTTTCAAGGAGCTATTTGGAGCAAAACAAATGCAACACAATAATTGGATATATATGGCCATTCCATAGCATTTGACTGCAATAAATAGCCTACACAGTGGACAGTCAGTTTTTAAAATGAGGGTCTCTTGGTCAACAGTTATACTCTAGCACAGAGGCCTGCTTTGGAAGCGGGTGAGACAGAACGCAAGGCTCCCGTGGAGTCATTCTACTATTGTGCACAGGAAGTGTGGTTGCCAACTGATTGTGATGGGGCTTTTTTTTGTCAGAGGAAATGACAACTAAAATTGTGTGTTACCTAAGTGGATGACAACCTGACAATGAATGTTTGGCCCTTTTCCCACAGAATAAATCAGGCCTAGTCTGAAAGAGTTGTATCATTCCACCTGTCTGACTCAGCCTTCTGGAAGTCTACAGTATTCAGAAATGCTACTACTCTATTACATCATGTTGCATCTTGGTCATACGGTGTGTACAAACACTAAACACCACCAAGCTAACTAGAGACGCCTCATTCTCAAGTCTAGAGCTGAAGTGTTTCTGCGCTACAGTGTTCTCCATAGAGGAATTTGAAGACGCATACACATGCTCATCAATTCCAATAGTCTAGAATAGTTTATTAATTAGAGGTCGATTTAATTAGGACCGATTTTGTTATGATAACCTGAAATCAgcctttttggatgccgattacaCTGcaatccacaaggagactgcgtggcaggctgatcAGCTGTTATGTGAGTTTCGGCATAAAAAtaaccttgtggctgcaaggatccaaagtaagttgctagctagcattaaacttatcttataaaaaaatatatatatat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU268403 True 1296 lncRNA 0.40 2 21865793 21867110

Neighbor

gene id symbol gene type direction distance location
LOC110513614 LOC106580392 coding upstream 10638 21846132 ~ 21855155 (+)
arhgef2 LOC106605464 coding upstream 20205 21790333 ~ 21845588 (+)
LOC110513574 LOC106580380 coding upstream 76419 21773668 ~ 21789374 (+)
LOC110513517 LOC100194668 coding upstream 121532 21738510 ~ 21744261 (+)
LOC118964374 NA coding upstream 121937 21743721 ~ 21743856 (+)
LOC110513748 decr1 coding downstream 21903 21889013 ~ 21893991 (+)
LOC118944503 NA coding downstream 143820 22010898 ~ 22012458 (+)
kiaa0319 LOC106580477 coding downstream 150469 22017579 ~ 22037490 (+)
LOC118947026 LOC106605474 coding downstream 184425 22051535 ~ 22057256 (+)
LOC110503910 LOC106580557 coding downstream 190374 22057484 ~ 22068080 (+)
G234799 NA non-coding upstream 61677 21803883 ~ 21804116 (+)
G234775 NA non-coding upstream 104455 21761137 ~ 21761338 (+)
G234677 NA non-coding upstream 277991 21587443 ~ 21587802 (+)
G234654 NA non-coding upstream 311252 21551421 ~ 21554541 (+)
G234500 NA non-coding upstream 363880 21501342 ~ 21501913 (+)
G234813 NA non-coding downstream 674 21867784 ~ 21868301 (+)
G234817 NA non-coding downstream 13941 21881051 ~ 21882985 (+)
G234822 NA non-coding downstream 33172 21900282 ~ 21900839 (+)
G234823 LOC106580458 non-coding downstream 35382 21902492 ~ 21906182 (+)
G234834 NA non-coding downstream 60789 21927899 ~ 21928166 (+)
G234340 LOC106580151 other upstream 578791 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 601287 21264075 ~ 21264506 (+)
G233545 NA other upstream 1257068 20608293 ~ 20608725 (+)
G233521 LOC106579937 other upstream 1300081 20558776 ~ 20565712 (+)
LOC110512505 LOC106579702 other upstream 2021141 19821356 ~ 19844652 (+)
G235426 LOC106581355 other downstream 437383 22303641 ~ 22304906 (+)
LOC110514034 NA other downstream 593430 22460524 ~ 22472917 (+)
G235571 NA other downstream 805626 22672736 ~ 22698834 (+)

Expression


Co-expression Network