Gene
RNA
| Item | Value |
|---|---|
| gene id | G235750 |
| gene name | LOC106580611 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22241024 ~ 22241932 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| neural-cadherin-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU269458 | True | 438 | lncRNA | 0.31 | 2 | 22241024 | 22241932 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110513818 | gbp | coding | downstream | 149696 | 22089856 ~ 22091328 (-) |
| LOC110513791 | LOC106580504 | coding | downstream | 189550 | 22043389 ~ 22051474 (-) |
| LOC118944504 | LOC106605473 | coding | downstream | 200140 | 22039478 ~ 22040884 (-) |
| LOC110503903 | LOC106605471 | coding | downstream | 291178 | 21937182 ~ 21949846 (-) |
| LOC110513756 | LOC106580458 | coding | downstream | 314710 | 21902473 ~ 21926314 (-) |
| LOC110513832 | ccne2 | coding | upstream | 52935 | 22294867 ~ 22302014 (-) |
| LOC110513844 | LOC106581355 | coding | upstream | 64007 | 22305939 ~ 22317533 (-) |
| LOC110513910 | LOC106605373 | coding | upstream | 82790 | 22324722 ~ 22336054 (-) |
| LOC110513923 | LOC106605373 | coding | upstream | 94530 | 22336462 ~ 22341729 (-) |
| trnas-aga-55 | NA | coding | upstream | 202158 | 22444090 ~ 22444171 (-) |
| G235312 | NA | non-coding | downstream | 145986 | 22092314 ~ 22095038 (-) |
| G235283 | NA | non-coding | downstream | 223710 | 22016919 ~ 22017314 (-) |
| G235279 | NA | non-coding | downstream | 227460 | 22013257 ~ 22013564 (-) |
| G235278 | NA | non-coding | downstream | 227854 | 22012937 ~ 22013170 (-) |
| G235276 | NA | non-coding | downstream | 231011 | 22009718 ~ 22010013 (-) |
| G235785 | LOC106580611 | non-coding | upstream | 41948 | 22283880 ~ 22284776 (-) |
| G235793 | NA | non-coding | upstream | 76994 | 22318926 ~ 22319165 (-) |
| G235794 | NA | non-coding | upstream | 77423 | 22319355 ~ 22319576 (-) |
| G235779 | NA | non-coding | upstream | 80233 | 22322165 ~ 22323438 (-) |
| G235740 | LOC106581338 | non-coding | upstream | 102232 | 22344164 ~ 22347983 (-) |
| LOC118946878 | NA | other | downstream | 485523 | 21744425 ~ 21755710 (-) |
| G235092 | LOC100194668 | other | downstream | 497613 | 21738845 ~ 21743411 (-) |
| G234621 | NA | other | downstream | 742192 | 21498408 ~ 21498832 (-) |
| G234600 | NA | other | downstream | 771079 | 21469661 ~ 21469945 (-) |
| LOC110513321 | LOC106580205 | other | downstream | 785308 | 21438546 ~ 21455972 (-) |
| G235881 | NA | other | upstream | 331901 | 22573833 ~ 22574989 (-) |
| G237047 | NA | other | upstream | 915177 | 23157109 ~ 23189031 (-) |
| LOC110514600 | ensa | other | upstream | 1529592 | 23771511 ~ 23780158 (-) |
| G237657 | LOC106605316 | other | upstream | 1938624 | 24180556 ~ 24183964 (-) |
| G237832 | NA | other | upstream | 2279287 | 24521219 ~ 24521544 (-) |
