G235426 (LOC106581355)


Basic Information

Item Value
gene id G235426
gene name LOC106581355
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22303641 ~ 22304906 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU269080
tcttaaagaagaagttacaggtctgtgagagccagaaatcttgcttgtttgtaggtgaccaaatacttatttttctgatatgtttttctcattttgtctgtcatagttgaagtgtacctatgatgaaaatgacaggcctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatttacttgaaaatgtatcatttgacaaattcggcacatttgggcagacttgatacaaaatattgtccagtattgcaatgcttcactggatcaatTGGAAacgttgcacacacactgctgacatctagtggccaaaatctaaaccgtgcctaaactgcaatattatatgatggcctttctcttgcatttcaaagatggagttttttttttgtattatcttttaccagatctgatGTGTTATATTTGTTAGATGTTAGATCTAATATGTTGTATAATATTATATtttgggggtggcaggtagcttagtggttagagcgttgggccagtaaccgaaaggttgctggatcgaatccccgagcaagGCACTGTTCT
>TU269077
CGGTAGTGCAGTGCAGAGCCGGCCTCCATGCTGTCTGCTATGCGGCTGCCGTCCCAGGCCTCCTAGACCAGGCACAGCAGCATGGACGACTGGCCCAAAGGGTACGTGGCGCCGCCCAGCACCAGCTCCTCTCCCGCAATGCCCTGCGCCGCCTCAACCTGCTGCGTACTGGAGGGGCCAAGCAGGTCAAGACCACCACCACCTATCTACACCAGCCTGGCCAGAGGCATCTCAACTACTGAGGTCCTGGCCCTATCCCTTACCCTCCAACCATCAATTCATCCATCTGTCTCAACCTGGATCCACGAAAAGAGTTCATCCTGCAACATGCTCTCCATCTTCCCTCCATCCACCGATCCTCCACTCTGAAATGAAGAGACGTGATGAGGACTCCTTTAGAATAAATGCCATAGG

Function

NR:

description
tumor protein p53-inducible nuclear protein 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269080 False 575 lncRNA 0.41 1 22303641 22304215
TU269077 True 414 TUCP 0.44 1 22304493 22304906

Neighbor

gene id symbol gene type direction distance location
LOC110503919 LOC106605377 coding upstream 13451 22227628 ~ 22292941 (+)
LOC118944657 LOC106580616 coding upstream 78754 22156347 ~ 22224887 (+)
LOC110503910 LOC106580557 coding upstream 235773 22057484 ~ 22068080 (+)
LOC118947026 LOC106605474 coding upstream 246385 22051535 ~ 22057256 (+)
kiaa0319 LOC106580477 coding upstream 266151 22017579 ~ 22037490 (+)
LOC110513878 LOC106581338 coding downstream 37529 22341744 ~ 22357183 (+)
LOC110513938 plekhf2 coding downstream 72546 22376761 ~ 22404817 (+)
LOC110513964 LOC106605368 coding downstream 126406 22430621 ~ 22441465 (+)
LOC110514034 NA coding downstream 156309 22460524 ~ 22472917 (+)
LOC118947118 NA coding downstream 181837 22482472 ~ 22488203 (+)
G235396 NA non-coding upstream 65357 22237940 ~ 22238284 (+)
G234970 NA non-coding upstream 171563 22131844 ~ 22132078 (+)
G234904 NA non-coding upstream 288206 22015116 ~ 22015435 (+)
G235428 NA non-coding downstream 14321 22318536 ~ 22318737 (+)
G235429 NA non-coding downstream 14707 22318922 ~ 22319223 (+)
G235432 NA non-coding downstream 17887 22322102 ~ 22323420 (+)
G235433 NA non-coding downstream 19375 22323590 ~ 22325001 (+)
G235434 NA non-coding downstream 20971 22325186 ~ 22325511 (+)
G234340 LOC106580151 other upstream 1016639 21286726 ~ 21287002 (+)
G234322 dcst2 other upstream 1039135 21264075 ~ 21264506 (+)
G233545 NA other upstream 1694916 20608293 ~ 20608725 (+)
G235426 LOC106581355 other downstream 278 22303641 ~ 22304906 (+)
G235571 NA other downstream 368521 22672736 ~ 22698834 (+)
G235569 NA other downstream 369310 22673525 ~ 22685509 (+)
G236271 LOC106581124 other downstream 844937 23144516 ~ 23191853 (+)
G236301 NA other downstream 893946 23198852 ~ 23199075 (+)

Expression


Co-expression Network