G235779


Basic Information

Item Value
gene id G235779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22322165 ~ 22323438 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU269495
tgATGGGAGAACACTTTATGGGAAATGTGTTTGATGGTGTTGTTACATGTGTATTTAACATGCAGGTTACCAAATTGTGGTCTATATCGAGGCTGTTAGGGAGTTGGGTTGTCCCACTGAGACGGCTAATGACTTGTGCTCAAAAACATTGAAAGGACTTTATACAGTGATAATGACTCACTGTGTGCTAGCGATGCTGTTGTGTTTGTATAGTTACCTATCTTGACTCGCACTTCCTTGAACTGGTGAAGAGAATGGAGGAATTTCATTTGTGTTCTCACCATTGAACTTCAGGCAAGGCAAAATGCAAATCAAGGTGGTTGCTTGAGTAGAAGTTTGTTTCAATACATTTGCCTGTTGGAGAGTTGCGAGACTGGTTTTGTTTGGTAAATTGTAGACGTTTTATGCTGCTTCTGAGCTAGATGGCCAACAAGAGGTACCCGGCCTCACTACCCTGGAACAtctaggtggcaggtagcctaatggttggagcattgggccagtaaccgaaagttccCTAGTTCAAATCTACGAGCCatcaaggtgaaaaatctgtctgtgcccttgagcaaggcacttaaccgtaattgctccagggtcaccCTGAGGGTGTCTTGGGAAGGTTAGaaatatgcaaaaaacacatttccaattcccACGTGTATTTACTTGGATAAATATAAGCACCCACTGAATTTTCACACCGGTAGCGTTTGCCGGCCAAAAGTACTTACCAACTCTGAACAACGTGCCGGACATAATTTGCAAACCAATTCTACATGTAGAATCAAGCTAAATTTTGTCAGAGGTCCACCAGTGGGTGGTCCCTAAAACGTACCGAACCTAGCATAATGCCAAATAATTGGGGGTTGATTTAGTCTAGTTTTGAACAAATGTATATTATCTCTTTTTGTTTTACTCAGGCAAGGAAATAATTGTTTAGTTCCCATCCCATAAGGGACAGGAATTGCTACTTCAATATTTATACGTTTGATAATATGTTAATATTTGTCAAGGAATGTATTTGATGCACTTGAGTCACGTATAGTGTTAATCACAAACTAAAGTCAATGAACTAAAACTGGTGTAAATGTTTCTCATGCTTGTGCCTCCTTTACAGTCATTGCTGTGAATGACAACTCGCATATCTTGTCTACTTGAAACGTATTGCCGTTAATATGCAAATGCAAGAATTGAGAACAACAAACTGCAGTTTAAGGTGGTTGGCATGTCACTGCTGAGTTTGTGAAGATTCTTTTTCACCAATAAAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269495 True 1274 lncRNA 0.38 1 22322165 22323438

Neighbor

gene id symbol gene type direction distance location
LOC110513844 LOC106581355 coding downstream 4632 22305939 ~ 22317533 (-)
LOC110513832 ccne2 coding downstream 20151 22294867 ~ 22302014 (-)
LOC110513818 gbp coding downstream 230837 22089856 ~ 22091328 (-)
LOC110513791 LOC106580504 coding downstream 270691 22043389 ~ 22051474 (-)
LOC118944504 LOC106605473 coding downstream 281281 22039478 ~ 22040884 (-)
LOC110513910 LOC106605373 coding upstream 1284 22324722 ~ 22336054 (-)
LOC110513923 LOC106605373 coding upstream 13024 22336462 ~ 22341729 (-)
trnas-aga-55 NA coding upstream 120652 22444090 ~ 22444171 (-)
trnas-aga-56 NA coding upstream 120844 22444282 ~ 22444363 (-)
trnas-aga-57 NA coding upstream 122054 22445492 ~ 22445573 (-)
G235794 NA non-coding downstream 2589 22319355 ~ 22319576 (-)
G235793 NA non-coding downstream 3000 22318926 ~ 22319165 (-)
G235785 LOC106580611 non-coding downstream 37389 22283880 ~ 22284776 (-)
G235750 LOC106580611 non-coding downstream 80233 22241024 ~ 22241932 (-)
G235312 NA non-coding downstream 227127 22092314 ~ 22095038 (-)
G235740 LOC106581338 non-coding upstream 20726 22344164 ~ 22347983 (-)
G235801 NA non-coding upstream 33940 22357378 ~ 22357604 (-)
G235805 NA non-coding upstream 37236 22360674 ~ 22360888 (-)
G235810 NA non-coding upstream 41111 22364549 ~ 22364762 (-)
G235809 LOC106955111 non-coding upstream 41673 22365111 ~ 22366009 (-)
LOC118946878 NA other downstream 566664 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 578754 21738845 ~ 21743411 (-)
G234621 NA other downstream 823333 21498408 ~ 21498832 (-)
G234600 NA other downstream 852220 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 866449 21438546 ~ 21455972 (-)
G235881 NA other upstream 250395 22573833 ~ 22574989 (-)
G237047 NA other upstream 833671 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1448086 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1857118 24180556 ~ 24183964 (-)
G237832 NA other upstream 2197781 24521219 ~ 24521544 (-)

Expression


Co-expression Network