Gene
RNA
| Item | Value |
|---|---|
| gene id | G235860 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22525403 ~ 22526021 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| ribosome biogenesis protein BMS1 homolog |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU269586 | True | 367 | lncRNA | 0.52 | 2 | 22525403 | 22526021 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514079 | LOC106605359 | coding | downstream | 18725 | 22499445 ~ 22506678 (-) |
| snrnp48 | LOC106581266 | coding | downstream | 29499 | 22488821 ~ 22495924 (-) |
| LOC110513982 | LOC106581283 | coding | downstream | 37381 | 22462380 ~ 22488022 (-) |
| LOC110514021 | LOC106581291 | coding | downstream | 64914 | 22457412 ~ 22460489 (-) |
| LOC110503922 | LOC106605367 | coding | downstream | 75703 | 22447092 ~ 22449700 (-) |
| LOC110505130 | NA | coding | upstream | 21779 | 22547800 ~ 22548892 (-) |
| LOC110514133 | LOC106581253 | coding | upstream | 49926 | 22575947 ~ 22603330 (-) |
| LOC110514157 | LOC106581233 | coding | upstream | 82583 | 22608604 ~ 22611971 (-) |
| bmper | LOC106581223 | coding | upstream | 92073 | 22618094 ~ 22641761 (-) |
| bbs9 | bbs9 | coding | upstream | 117820 | 22643841 ~ 22848755 (-) |
| G235846 | NA | non-coding | downstream | 96879 | 22428231 ~ 22428524 (-) |
| G235843 | NA | non-coding | downstream | 100874 | 22424213 ~ 22424529 (-) |
| G235809 | LOC106955111 | non-coding | downstream | 159394 | 22365111 ~ 22366009 (-) |
| G235900 | NA | non-coding | upstream | 56804 | 22582825 ~ 22584854 (-) |
| G235916 | NA | non-coding | upstream | 73809 | 22599830 ~ 22600792 (-) |
| G235921 | NA | non-coding | upstream | 81856 | 22607877 ~ 22608110 (-) |
| G235959 | NA | non-coding | upstream | 146254 | 22672275 ~ 22698611 (-) |
| G235938 | NA | non-coding | upstream | 156248 | 22682269 ~ 22685521 (-) |
| LOC118946878 | NA | other | downstream | 769902 | 21744425 ~ 21755710 (-) |
| G235092 | LOC100194668 | other | downstream | 781992 | 21738845 ~ 21743411 (-) |
| G234621 | NA | other | downstream | 1026571 | 21498408 ~ 21498832 (-) |
| G234600 | NA | other | downstream | 1055458 | 21469661 ~ 21469945 (-) |
| LOC110513321 | LOC106580205 | other | downstream | 1069687 | 21438546 ~ 21455972 (-) |
| G235881 | NA | other | upstream | 47812 | 22573833 ~ 22574989 (-) |
| G237047 | NA | other | upstream | 631088 | 23157109 ~ 23189031 (-) |
| LOC110514600 | ensa | other | upstream | 1245503 | 23771511 ~ 23780158 (-) |
| G237657 | LOC106605316 | other | upstream | 1654535 | 24180556 ~ 24183964 (-) |
| G237832 | NA | other | upstream | 1995198 | 24521219 ~ 24521544 (-) |
