G235881


Basic Information

Item Value
gene id G235881
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22573833 ~ 22574989 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU269608
TTTAAGTCACTGGAGGGGGAAGAAAACAAATGTAATTCTACGTAAAGAAGAATGAAACGACAAAGAGCAGCCATTTTGTTAATGCAAAGGAAAGTCCATGCTTTcctttgtaaaaaataaagtatGTTTGAGGAGTGGGTCTTGTCCACAAGACTGTATAGCATTGACACTTCACAGTAATTGTCCAGAAAATGACAAAGCCACTAGCAGTCTTGCCTGTTTGACAAAATGTTAACAGAGAAGGAGAATCCGCTGTGAAGTGTTCAAGTCCTTGCTGAAGTGTAAACAAGAGACTGAAGATTGGCGATACGTTTCAAATGTCGTTTTCCAtgcgagtacacacacacacaagcaaaatTCCAGGAACTTATAAATTCCTTGAATTTTGCAACCACACACACGTCCTGCATGCCTGTGTCACGCATCCTTAGAAATACCAAAGATTAGTCTTCATGCCTGTGTCACATTCCTGTGCAACAGAGAAATCCCTGTCGTGGTGCGGTCTCCTGAGAAAAAGACAGTAGCGGTTGCAGTTGAGAACATCACCCTTCGTTCTTGGTAAATACCAGCACTGCCTCGAGTACCTAGACTGGTGGTCAACAAGCACCAAGTAATTGAACATTGAAAATCATAAGGGCCATAGTTGTTGTGACATCATTTACTGTATCTGTCATTATGGCAAAGGAGGATGGAAGCACCTCCAACATTCGCTCTGATAgtttacatttttttggtacATGTTCTTACACACCCCTCAGCACATAGAGGGCTAGGTTCCATACCAAACACTTGTCCCTTTCCAAATACCCTTGGTAATAAAATAAATCAGTGTCTTTTGGGTACTCCTGCAGTCGTAACAAGTTCCACCCAGAGTTCAGGAAAAAGTGAGTGTCCATGTTGTGAGCAAGTTATTCCTGGTGTCACACCGGAatccttcccttccttcctctccttacTGGAGCTGGGAGACCTTTAGGGGCGTGGTGCTGCTGAAGTCCAGGAAGAAGGGTCCTTCCTGTTTGGGCAGGAAGGTGGTGGGGATGACGTTGTAGATGCCAGCGGGGACATGGTCCGCCTCCATGTAGCA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269608 True 1087 TUCP 0.50 2 22573833 22574989

Neighbor

gene id symbol gene type direction distance location
LOC110505130 NA coding downstream 24941 22547800 ~ 22548892 (-)
LOC110514079 LOC106605359 coding downstream 67155 22499445 ~ 22506678 (-)
snrnp48 LOC106581266 coding downstream 77929 22488821 ~ 22495924 (-)
LOC110513982 LOC106581283 coding downstream 85811 22462380 ~ 22488022 (-)
LOC110514021 LOC106581291 coding downstream 113344 22457412 ~ 22460489 (-)
LOC110514133 LOC106581253 coding upstream 958 22575947 ~ 22603330 (-)
LOC110514157 LOC106581233 coding upstream 33615 22608604 ~ 22611971 (-)
bmper LOC106581223 coding upstream 43105 22618094 ~ 22641761 (-)
bbs9 bbs9 coding upstream 68852 22643841 ~ 22848755 (-)
trnap-agg-7 NA coding upstream 274235 22849224 ~ 22849295 (-)
G235860 NA non-coding downstream 47812 22525403 ~ 22526021 (-)
LOC110503922 LOC106605367 non-coding downstream 125608 22447092 ~ 22449700 (-)
G235846 NA non-coding downstream 145309 22428231 ~ 22428524 (-)
G235843 NA non-coding downstream 149304 22424213 ~ 22424529 (-)
G235900 NA non-coding upstream 7836 22582825 ~ 22584854 (-)
G235916 NA non-coding upstream 24841 22599830 ~ 22600792 (-)
G235921 NA non-coding upstream 32888 22607877 ~ 22608110 (-)
G235959 NA non-coding upstream 97286 22672275 ~ 22698611 (-)
G235938 NA non-coding upstream 107280 22682269 ~ 22685521 (-)
LOC118946878 NA other downstream 818332 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 830422 21738845 ~ 21743411 (-)
G234621 NA other downstream 1075001 21498408 ~ 21498832 (-)
G234600 NA other downstream 1103888 21469661 ~ 21469945 (-)
LOC110513321 LOC106580205 other downstream 1118117 21438546 ~ 21455972 (-)
G237047 NA other upstream 582120 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1196535 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1605567 24180556 ~ 24183964 (-)
G237832 NA other upstream 1946230 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 2194573 24767049 ~ 24799511 (-)

Expression


Co-expression Network