G235563


Basic Information

Item Value
gene id G235563
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22605903 ~ 22606114 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU269249
agacctgaatccaattgagcacatctgggacatcatgtctcgctccatccaccaacgccacgttgcaccacagactgtccaggagttggcggatgttttagtccaggtctgggaggagatccctcaggagaccatccgccacctcatcaggagcatgcccaggcgttgtagggaggtcatacaggcacgtggaggccacacacactactgag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269249 True 212 lncRNA 0.58 1 22605903 22606114

Neighbor

gene id symbol gene type direction distance location
LOC110514114 can7 coding upstream 30793 22557122 ~ 22575110 (+)
LOC110514095 LOC106581260 coding upstream 61804 22513124 ~ 22544099 (+)
LOC118947118 NA coding upstream 119387 22482472 ~ 22488203 (+)
LOC110514034 NA coding upstream 133764 22460524 ~ 22472917 (+)
LOC110513964 LOC106605368 coding upstream 164438 22430621 ~ 22441465 (+)
LOC110514168 LOC106581241 coding downstream 5922 22612036 ~ 22618089 (+)
LOC110514282 LOC106581183 coding downstream 263626 22869740 ~ 22893776 (+)
LOC110514335 LOC106581155 coding downstream 513269 23119383 ~ 23133074 (+)
smarcc1a LOC106605342 coding downstream 604304 23210418 ~ 23227568 (+)
LOC110514420 LOC106581064 coding downstream 630148 23236262 ~ 23290996 (+)
G235545 NA non-coding upstream 26096 22579478 ~ 22579807 (+)
G235495 LOC106581291 non-coding upstream 145437 22459160 ~ 22460466 (+)
G235496 NA non-coding upstream 146813 22457195 ~ 22459090 (+)
G235484 NA non-coding upstream 163820 22441825 ~ 22442083 (+)
G235564 NA non-coding downstream 271 22606385 ~ 22606585 (+)
G235569 NA non-coding downstream 67411 22673525 ~ 22685509 (+)
G235580 NA non-coding downstream 128650 22734764 ~ 22735540 (+)
G235619 NA non-coding downstream 152430 22758544 ~ 22759003 (+)
G235426 LOC106581355 other upstream 300997 22303641 ~ 22304906 (+)
LOC110503910 LOC106580557 other upstream 537823 22057484 ~ 22068080 (+)
kiaa0319 LOC106580477 other upstream 585919 22017579 ~ 22037490 (+)
G234340 LOC106580151 other upstream 1318901 21286726 ~ 21287002 (+)
G235571 NA other downstream 66622 22672736 ~ 22698834 (+)
G236271 LOC106581124 other downstream 543038 23144516 ~ 23191853 (+)
G236301 NA other downstream 592738 23198852 ~ 23199075 (+)
G236370 LOC106581434 other downstream 740766 23346880 ~ 23349378 (+)

Expression


Co-expression Network