Gene
RNA
| Item | Value |
|---|---|
| gene id | G235959 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22672275 ~ 22698611 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: pleckstrin homology domain-containing family A member 7-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU269699 | True | 363 | lncRNA | 0.44 | 2 | 22672275 | 22698611 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| bmper | LOC106581223 | coding | downstream | 30514 | 22618094 ~ 22641761 (-) |
| LOC110514157 | LOC106581233 | coding | downstream | 60304 | 22608604 ~ 22611971 (-) |
| LOC110514133 | LOC106581253 | coding | downstream | 68945 | 22575947 ~ 22603330 (-) |
| LOC110505130 | NA | coding | downstream | 123383 | 22547800 ~ 22548892 (-) |
| LOC110514079 | LOC106605359 | coding | downstream | 165597 | 22499445 ~ 22506678 (-) |
| trnap-agg-7 | NA | coding | upstream | 150613 | 22849224 ~ 22849295 (-) |
| LOC110503928 | LOC106581194 | coding | upstream | 150894 | 22849505 ~ 22866403 (-) |
| LOC110514295 | LOC106605350 | coding | upstream | 169004 | 22867615 ~ 22869747 (-) |
| LOC110514303 | prdm1 | coding | upstream | 205118 | 22903729 ~ 22919447 (-) |
| LOC110514322 | LOC106581161 | coding | upstream | 339149 | 23037760 ~ 23051032 (-) |
| G235921 | NA | non-coding | downstream | 64165 | 22607877 ~ 22608110 (-) |
| G235916 | NA | non-coding | downstream | 71483 | 22599830 ~ 22600792 (-) |
| G235900 | NA | non-coding | downstream | 87421 | 22582825 ~ 22584854 (-) |
| G235860 | NA | non-coding | downstream | 146254 | 22525403 ~ 22526021 (-) |
| snrnp48 | LOC106581266 | non-coding | downstream | 176351 | 22488821 ~ 22495924 (-) |
| G236003 | NA | non-coding | upstream | 70555 | 22769166 ~ 22770663 (-) |
| G236049 | NA | non-coding | upstream | 150233 | 22848844 ~ 22849153 (-) |
| G236082 | NA | non-coding | upstream | 198709 | 22897320 ~ 22897536 (-) |
| G236084 | NA | non-coding | upstream | 201106 | 22899717 ~ 22899933 (-) |
| G236085 | NA | non-coding | upstream | 201916 | 22900527 ~ 22900770 (-) |
| G235881 | NA | other | downstream | 97286 | 22573833 ~ 22574989 (-) |
| LOC118946878 | NA | other | downstream | 916774 | 21744425 ~ 21755710 (-) |
| G235092 | LOC100194668 | other | downstream | 928864 | 21738845 ~ 21743411 (-) |
| G234621 | NA | other | downstream | 1173443 | 21498408 ~ 21498832 (-) |
| G234600 | NA | other | downstream | 1202330 | 21469661 ~ 21469945 (-) |
| G237047 | NA | other | upstream | 458498 | 23157109 ~ 23189031 (-) |
| LOC110514600 | ensa | other | upstream | 1072913 | 23771511 ~ 23780158 (-) |
| G237657 | LOC106605316 | other | upstream | 1481945 | 24180556 ~ 24183964 (-) |
| G237832 | NA | other | upstream | 1822608 | 24521219 ~ 24521544 (-) |
| LOC110515154 | LOC106605289 | other | upstream | 2070951 | 24767049 ~ 24799511 (-) |
