Gene
RNA
| Item | Value |
|---|---|
| gene id | G235580 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22734764 ~ 22735540 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU269284 | True | 729 | lncRNA | 0.51 | 2 | 22734764 | 22735540 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514168 | LOC106581241 | coding | upstream | 116681 | 22612036 ~ 22618089 (+) |
| LOC110514114 | can7 | coding | upstream | 159654 | 22557122 ~ 22575110 (+) |
| LOC110514095 | LOC106581260 | coding | upstream | 190665 | 22513124 ~ 22544099 (+) |
| LOC118947118 | NA | coding | upstream | 248248 | 22482472 ~ 22488203 (+) |
| LOC110514034 | NA | coding | upstream | 262625 | 22460524 ~ 22472917 (+) |
| LOC110514282 | LOC106581183 | coding | downstream | 134200 | 22869740 ~ 22893776 (+) |
| LOC110514335 | LOC106581155 | coding | downstream | 383843 | 23119383 ~ 23133074 (+) |
| smarcc1a | LOC106605342 | coding | downstream | 474878 | 23210418 ~ 23227568 (+) |
| LOC110514420 | LOC106581064 | coding | downstream | 500722 | 23236262 ~ 23290996 (+) |
| elp6 | LOC106581052 | coding | downstream | 567232 | 23302772 ~ 23306081 (+) |
| G235569 | NA | non-coding | upstream | 49255 | 22673525 ~ 22685509 (+) |
| G235564 | NA | non-coding | upstream | 128179 | 22606385 ~ 22606585 (+) |
| G235563 | NA | non-coding | upstream | 128650 | 22605903 ~ 22606114 (+) |
| G235545 | NA | non-coding | upstream | 154957 | 22579478 ~ 22579807 (+) |
| G235619 | NA | non-coding | downstream | 23004 | 22758544 ~ 22759003 (+) |
| G235704 | NA | non-coding | downstream | 113317 | 22848857 ~ 22849200 (+) |
| G235678 | NA | non-coding | downstream | 160225 | 22895765 ~ 22896704 (+) |
| G235685 | NA | non-coding | downstream | 168202 | 22903742 ~ 22904675 (+) |
| G235733 | NA | non-coding | downstream | 188602 | 22924142 ~ 22924543 (+) |
| G235571 | NA | other | upstream | 35930 | 22672736 ~ 22698834 (+) |
| G235426 | LOC106581355 | other | upstream | 429858 | 22303641 ~ 22304906 (+) |
| LOC110503910 | LOC106580557 | other | upstream | 666684 | 22057484 ~ 22068080 (+) |
| G236271 | LOC106581124 | other | downstream | 413612 | 23144516 ~ 23191853 (+) |
| G236301 | NA | other | downstream | 463312 | 23198852 ~ 23199075 (+) |
| G236370 | LOC106581434 | other | downstream | 611340 | 23346880 ~ 23349378 (+) |
| G236372 | LOC106581434 | other | downstream | 614551 | 23350091 ~ 23350815 (+) |
| LOC110514613 | hormad1 | other | downstream | 1057257 | 23780400 ~ 23795199 (+) |
