G236003


Basic Information

Item Value
gene id G236003
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 22769166 ~ 22770663 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU269743
GTTGATTGTTGAGGGGAGTTAATGCTACAAAGAAACATGAGTACATTTTAGTTGTCTTGTTAGTTTTCCACTATCGTGTTTCAAGCATTGACTTGCTAATCAGGTCTGTCTCTCTTTGGGAAGACGGAACAAAAAGATAGACAAGGCAAGGGATCACCCAATGGACCAGTGGTATTTAGTTTCTGGACAGAGAATGTGCATCCTGTATTCATGGGTTTATATGTGCAGTATGTGTGTGCTCTTGCCTGATAGTGCGCATgtctataagtgtgtgtgtgtgtgtgtgtgtgtgtgtgcagcctggGAGGTGAGCTGTTAATGACAGGccaggggagtgtgtgtgctAAAATGACTAGAGAAAAGTCCTGTGTGATTAGAGGCCTCAGTTAGCCTGGCTGAGGCTAAATATGGAAACCGTGTGGAGAGAGACTAAATACTGTCCACTGACTCACACTATTCCAATGACCAATGACAGAGCATCGTCCGAGTATGCTCACTAAGCACTTTAGTAAGCCTGTGTGTAAAAACTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgtaaaaaCTGATGCTCTTTACTTCACTATGTCTGTGTgttaaaaCTGATGCTCTTTACTTCACTATGTTGTtgacactgtgtctgtgtgttaaaaCTGATGCTCTTTACTTCACTATGTCTGTGTGTTAAAACTGATGCTCTTTACTTCACTATGTTGTTgacactgtgtctgtgtggatgtgTTGCAGGTTTGGACCTTTTTGACTTTTGTGTCTATTGTgaaagagacagtcagacagacagcatttgaatatgtgtttgtgtgtgcgagaCGGAgagtgcgcgcgcgtgtgtgtgtgtgtctttttaaaACAAGCGAACTCAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU269743 True 1154 lncRNA 0.40 2 22769166 22770663

Neighbor

gene id symbol gene type direction distance location
bmper LOC106581223 coding downstream 127405 22618094 ~ 22641761 (-)
LOC110514157 LOC106581233 coding downstream 157195 22608604 ~ 22611971 (-)
LOC110514133 LOC106581253 coding downstream 165836 22575947 ~ 22603330 (-)
LOC110505130 NA coding downstream 220274 22547800 ~ 22548892 (-)
LOC110514079 LOC106605359 coding downstream 262488 22499445 ~ 22506678 (-)
trnap-agg-7 NA coding upstream 78561 22849224 ~ 22849295 (-)
LOC110503928 LOC106581194 coding upstream 78842 22849505 ~ 22866403 (-)
LOC110514295 LOC106605350 coding upstream 96952 22867615 ~ 22869747 (-)
LOC110514303 prdm1 coding upstream 133066 22903729 ~ 22919447 (-)
LOC110514322 LOC106581161 coding upstream 267097 23037760 ~ 23051032 (-)
G235959 NA non-coding downstream 70555 22672275 ~ 22698611 (-)
G235962 NA non-coding downstream 77695 22689891 ~ 22691471 (-)
G235938 NA non-coding downstream 83645 22682269 ~ 22685521 (-)
G235921 NA non-coding downstream 161056 22607877 ~ 22608110 (-)
G235916 NA non-coding downstream 168374 22599830 ~ 22600792 (-)
G236049 NA non-coding upstream 78181 22848844 ~ 22849153 (-)
G236082 NA non-coding upstream 126657 22897320 ~ 22897536 (-)
G236084 NA non-coding upstream 129054 22899717 ~ 22899933 (-)
G236085 NA non-coding upstream 129864 22900527 ~ 22900770 (-)
G235881 NA other downstream 194177 22573833 ~ 22574989 (-)
LOC118946878 NA other downstream 1013665 21744425 ~ 21755710 (-)
G235092 LOC100194668 other downstream 1025755 21738845 ~ 21743411 (-)
G234621 NA other downstream 1270334 21498408 ~ 21498832 (-)
G234600 NA other downstream 1299221 21469661 ~ 21469945 (-)
G237047 NA other upstream 386446 23157109 ~ 23189031 (-)
LOC110514600 ensa other upstream 1000861 23771511 ~ 23780158 (-)
G237657 LOC106605316 other upstream 1409893 24180556 ~ 24183964 (-)
G237832 NA other upstream 1750556 24521219 ~ 24521544 (-)
LOC110515154 LOC106605289 other upstream 1998899 24767049 ~ 24799511 (-)

Expression


Co-expression Network