Gene
RNA
| Item | Value |
|---|---|
| gene id | G236121 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 22955990 ~ 22956201 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU269872 | True | 212 | lncRNA | 0.34 | 1 | 22955990 | 22956201 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514282 | LOC106581183 | coding | upstream | 62214 | 22869740 ~ 22893776 (+) |
| LOC110514168 | LOC106581241 | coding | upstream | 337907 | 22612036 ~ 22618089 (+) |
| LOC110514114 | can7 | coding | upstream | 380880 | 22557122 ~ 22575110 (+) |
| LOC110514095 | LOC106581260 | coding | upstream | 411891 | 22513124 ~ 22544099 (+) |
| LOC118947118 | NA | coding | upstream | 469474 | 22482472 ~ 22488203 (+) |
| LOC110514335 | LOC106581155 | coding | downstream | 163182 | 23119383 ~ 23133074 (+) |
| smarcc1a | LOC106605342 | coding | downstream | 254217 | 23210418 ~ 23227568 (+) |
| LOC110514420 | LOC106581064 | coding | downstream | 280061 | 23236262 ~ 23290996 (+) |
| elp6 | LOC106581052 | coding | downstream | 346571 | 23302772 ~ 23306081 (+) |
| LOC110514448 | LOC106581016 | coding | downstream | 350031 | 23306232 ~ 23342019 (+) |
| G236118 | NA | non-coding | upstream | 4382 | 22951314 ~ 22951608 (+) |
| G235733 | NA | non-coding | upstream | 31447 | 22924142 ~ 22924543 (+) |
| G235685 | NA | non-coding | upstream | 51315 | 22903742 ~ 22904675 (+) |
| G235678 | NA | non-coding | upstream | 59286 | 22895765 ~ 22896704 (+) |
| G235704 | NA | non-coding | upstream | 106790 | 22848857 ~ 22849200 (+) |
| G236140 | NA | non-coding | downstream | 18483 | 22974684 ~ 22975472 (+) |
| G236168 | NA | non-coding | downstream | 37822 | 22994023 ~ 22994248 (+) |
| G236181 | NA | non-coding | downstream | 47368 | 23003569 ~ 23003948 (+) |
| G236234 | LOC106581161 | non-coding | downstream | 79853 | 23036054 ~ 23040059 (+) |
| G236235 | LOC106581161 | non-coding | downstream | 84056 | 23040257 ~ 23042307 (+) |
| G235571 | NA | other | upstream | 257156 | 22672736 ~ 22698834 (+) |
| G235569 | NA | other | upstream | 275262 | 22673525 ~ 22685509 (+) |
| LOC110514034 | NA | other | upstream | 483073 | 22460524 ~ 22472917 (+) |
| G235426 | LOC106581355 | other | upstream | 651084 | 22303641 ~ 22304906 (+) |
| LOC110503910 | LOC106580557 | other | upstream | 887910 | 22057484 ~ 22068080 (+) |
| G236271 | LOC106581124 | other | downstream | 192951 | 23144516 ~ 23191853 (+) |
| G236301 | NA | other | downstream | 242651 | 23198852 ~ 23199075 (+) |
| G236370 | LOC106581434 | other | downstream | 390679 | 23346880 ~ 23349378 (+) |
| G236372 | LOC106581434 | other | downstream | 393890 | 23350091 ~ 23350815 (+) |
| LOC110514613 | hormad1 | other | downstream | 836596 | 23780400 ~ 23795199 (+) |
