Gene
RNA
| Item | Value |
|---|---|
| gene id | G237041 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 23122483 ~ 23123076 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| probable C-mannosyltransferase DPY19L1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU270894 | True | 134 | lncRNA | 0.57 | 2 | 23122483 | 23123076 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514322 | LOC106581161 | coding | downstream | 71451 | 23037760 ~ 23051032 (-) |
| LOC110514303 | prdm1 | coding | downstream | 203036 | 22903729 ~ 22919447 (-) |
| LOC110514295 | LOC106605350 | coding | downstream | 252736 | 22867615 ~ 22869747 (-) |
| LOC110503928 | LOC106581194 | coding | downstream | 256080 | 22849505 ~ 22866403 (-) |
| trnap-agg-7 | NA | coding | downstream | 273188 | 22849224 ~ 22849295 (-) |
| LOC110514382 | NA | coding | upstream | 15560 | 23138636 ~ 23140888 (-) |
| LOC118944658 | LOC100136303 | coding | upstream | 17758 | 23140834 ~ 23142966 (-) |
| LOC110514348 | LOC106581121 | coding | upstream | 21440 | 23144516 ~ 23164384 (-) |
| LOC110514368 | LOC106581124 | coding | upstream | 49534 | 23172610 ~ 23196343 (-) |
| LOC110503934 | LOC106581009 | coding | upstream | 219047 | 23342123 ~ 23368891 (-) |
| G237009 | NA | non-coding | downstream | 57523 | 23064754 ~ 23064960 (-) |
| G236994 | NA | non-coding | downstream | 85780 | 23036088 ~ 23036703 (-) |
| G236196 | NA | non-coding | downstream | 108651 | 23013580 ~ 23013832 (-) |
| G236192 | NA | non-coding | downstream | 111126 | 23011124 ~ 23011357 (-) |
| G236174 | NA | non-coding | downstream | 124510 | 22997631 ~ 22997973 (-) |
| G237033 | NA | non-coding | upstream | 20438 | 23143514 ~ 23143904 (-) |
| G237028 | NA | non-coding | upstream | 20884 | 23143960 ~ 23144390 (-) |
| G237068 | NA | non-coding | upstream | 67535 | 23190611 ~ 23191037 (-) |
| G237069 | NA | non-coding | upstream | 70947 | 23194023 ~ 23194443 (-) |
| G237080 | NA | non-coding | upstream | 84674 | 23207750 ~ 23207980 (-) |
| G235881 | NA | other | downstream | 547494 | 22573833 ~ 22574989 (-) |
| LOC118946878 | NA | other | downstream | 1366982 | 21744425 ~ 21755710 (-) |
| G235092 | LOC100194668 | other | downstream | 1379072 | 21738845 ~ 21743411 (-) |
| G234621 | NA | other | downstream | 1623651 | 21498408 ~ 21498832 (-) |
| G234600 | NA | other | downstream | 1652538 | 21469661 ~ 21469945 (-) |
| G237047 | NA | other | upstream | 34033 | 23157109 ~ 23189031 (-) |
| LOC110514600 | ensa | other | upstream | 648448 | 23771511 ~ 23780158 (-) |
| G237657 | LOC106605316 | other | upstream | 1057480 | 24180556 ~ 24183964 (-) |
| G237832 | NA | other | upstream | 1398143 | 24521219 ~ 24521544 (-) |
| LOC110515154 | LOC106605289 | other | upstream | 1646486 | 24767049 ~ 24799511 (-) |
