Gene
RNA
| Item | Value |
|---|---|
| gene id | G236296 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 23192836 ~ 23193447 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU270060 | True | 612 | lncRNA | 0.46 | 1 | 23192836 | 23193447 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514335 | LOC106581155 | coding | upstream | 59762 | 23119383 ~ 23133074 (+) |
| LOC110514282 | LOC106581183 | coding | upstream | 299060 | 22869740 ~ 22893776 (+) |
| LOC110514168 | LOC106581241 | coding | upstream | 574753 | 22612036 ~ 22618089 (+) |
| LOC110514114 | can7 | coding | upstream | 617726 | 22557122 ~ 22575110 (+) |
| LOC110514095 | LOC106581260 | coding | upstream | 648737 | 22513124 ~ 22544099 (+) |
| smarcc1a | LOC106605342 | coding | downstream | 16971 | 23210418 ~ 23227568 (+) |
| LOC110514420 | LOC106581064 | coding | downstream | 42815 | 23236262 ~ 23290996 (+) |
| elp6 | LOC106581052 | coding | downstream | 109325 | 23302772 ~ 23306081 (+) |
| LOC110514448 | LOC106581016 | coding | downstream | 112785 | 23306232 ~ 23342019 (+) |
| LOC110514472 | LOC106581037 | coding | downstream | 175557 | 23369004 ~ 23374440 (+) |
| G236271 | LOC106581124 | non-coding | upstream | 983 | 23144516 ~ 23191853 (+) |
| G236254 | NA | non-coding | upstream | 53911 | 23071480 ~ 23138925 (+) |
| G236249 | NA | non-coding | upstream | 127402 | 23065157 ~ 23065434 (+) |
| G236235 | LOC106581161 | non-coding | upstream | 150529 | 23040257 ~ 23042307 (+) |
| G236234 | LOC106581161 | non-coding | upstream | 152777 | 23036054 ~ 23040059 (+) |
| G236298 | NA | non-coding | downstream | 509 | 23193956 ~ 23194256 (+) |
| G236300 | NA | non-coding | downstream | 4685 | 23198132 ~ 23198366 (+) |
| G236302 | NA | non-coding | downstream | 6437 | 23199884 ~ 23200135 (+) |
| G236309 | NA | non-coding | downstream | 12069 | 23205516 ~ 23205747 (+) |
| G236312 | NA | non-coding | downstream | 14561 | 23208008 ~ 23208215 (+) |
| G235571 | NA | other | upstream | 494002 | 22672736 ~ 22698834 (+) |
| G235569 | NA | other | upstream | 512108 | 22673525 ~ 22685509 (+) |
| LOC110514034 | NA | other | upstream | 719919 | 22460524 ~ 22472917 (+) |
| G235426 | LOC106581355 | other | upstream | 887930 | 22303641 ~ 22304906 (+) |
| G236301 | NA | other | downstream | 5405 | 23198852 ~ 23199075 (+) |
| G236370 | LOC106581434 | other | downstream | 153433 | 23346880 ~ 23349378 (+) |
| G236372 | LOC106581434 | other | downstream | 156644 | 23350091 ~ 23350815 (+) |
| LOC110514613 | hormad1 | other | downstream | 599350 | 23780400 ~ 23795199 (+) |
| LOC110514733 | LOC106580799 | other | downstream | 715303 | 23908750 ~ 23932207 (+) |
