G236300


Basic Information

Item Value
gene id G236300
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23198132 ~ 23198366 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270065
gtccctggttcgcctgcatagcccagtgcgggctattccatctcgccgcactggcagggcgaccgggagcattcaaccaggtaaggttgggcaggctcggtgctcaagagctccagtgcgcctgcacggtccggtctacccccagtaccacctccacgcaccagccctccggtggcagctccccgcaccaggcttcctgtgcgagttctcggcccagtaccaccagtgccagcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270065 True 235 lncRNA 0.50 1 23198132 23198366

Neighbor

gene id symbol gene type direction distance location
LOC110514335 LOC106581155 coding upstream 65058 23119383 ~ 23133074 (+)
LOC110514282 LOC106581183 coding upstream 304356 22869740 ~ 22893776 (+)
LOC110514168 LOC106581241 coding upstream 580049 22612036 ~ 22618089 (+)
LOC110514114 can7 coding upstream 623022 22557122 ~ 22575110 (+)
LOC110514095 LOC106581260 coding upstream 654033 22513124 ~ 22544099 (+)
smarcc1a LOC106605342 coding downstream 12052 23210418 ~ 23227568 (+)
LOC110514420 LOC106581064 coding downstream 37896 23236262 ~ 23290996 (+)
elp6 LOC106581052 coding downstream 104406 23302772 ~ 23306081 (+)
LOC110514448 LOC106581016 coding downstream 107866 23306232 ~ 23342019 (+)
LOC110514472 LOC106581037 coding downstream 170638 23369004 ~ 23374440 (+)
G236298 NA non-coding upstream 3876 23193956 ~ 23194256 (+)
G236296 NA non-coding upstream 4685 23192836 ~ 23193447 (+)
G236271 LOC106581124 non-coding upstream 6279 23144516 ~ 23191853 (+)
G236254 NA non-coding upstream 59207 23071480 ~ 23138925 (+)
G236249 NA non-coding upstream 132698 23065157 ~ 23065434 (+)
G236302 NA non-coding downstream 1518 23199884 ~ 23200135 (+)
G236309 NA non-coding downstream 7150 23205516 ~ 23205747 (+)
G236312 NA non-coding downstream 9642 23208008 ~ 23208215 (+)
G236314 NA non-coding downstream 10923 23209289 ~ 23209518 (+)
G236330 NA non-coding downstream 36353 23234719 ~ 23234939 (+)
G235571 NA other upstream 499298 22672736 ~ 22698834 (+)
G235569 NA other upstream 517404 22673525 ~ 22685509 (+)
LOC110514034 NA other upstream 725215 22460524 ~ 22472917 (+)
G235426 LOC106581355 other upstream 893226 22303641 ~ 22304906 (+)
G236301 NA other downstream 486 23198852 ~ 23199075 (+)
G236370 LOC106581434 other downstream 148514 23346880 ~ 23349378 (+)
G236372 LOC106581434 other downstream 151725 23350091 ~ 23350815 (+)
LOC110514613 hormad1 other downstream 594431 23780400 ~ 23795199 (+)
LOC110514733 LOC106580799 other downstream 710384 23908750 ~ 23932207 (+)

Expression


Co-expression Network