G236312


Basic Information

Item Value
gene id G236312
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23208008 ~ 23208215 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270077
cagggtagcctagtggttagagcgttggactagtaaccggaaggttgcaagttcaaacccccgagctgacaaggtcgttctgcccctgaacaggcagttaacccactgttcctaggccgtcattgaaaataagaatttgttcttaactgacttgcctagttaaataaaggtaaaataaaaaaataaaaaatattgttcAACTAGCTAT

Function

NR:

description
protein wntless homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270077 True 208 lncRNA 0.41 1 23208008 23208215

Neighbor

gene id symbol gene type direction distance location
LOC110514335 LOC106581155 coding upstream 74934 23119383 ~ 23133074 (+)
LOC110514282 LOC106581183 coding upstream 314232 22869740 ~ 22893776 (+)
LOC110514168 LOC106581241 coding upstream 589925 22612036 ~ 22618089 (+)
LOC110514114 can7 coding upstream 632898 22557122 ~ 22575110 (+)
LOC110514095 LOC106581260 coding upstream 663909 22513124 ~ 22544099 (+)
smarcc1a LOC106605342 coding downstream 2203 23210418 ~ 23227568 (+)
LOC110514420 LOC106581064 coding downstream 28047 23236262 ~ 23290996 (+)
elp6 LOC106581052 coding downstream 94557 23302772 ~ 23306081 (+)
LOC110514448 LOC106581016 coding downstream 98017 23306232 ~ 23342019 (+)
LOC110514472 LOC106581037 coding downstream 160789 23369004 ~ 23374440 (+)
G236309 NA non-coding upstream 2261 23205516 ~ 23205747 (+)
G236302 NA non-coding upstream 7873 23199884 ~ 23200135 (+)
G236300 NA non-coding upstream 9642 23198132 ~ 23198366 (+)
G236298 NA non-coding upstream 13752 23193956 ~ 23194256 (+)
G236296 NA non-coding upstream 14561 23192836 ~ 23193447 (+)
G236314 NA non-coding downstream 1074 23209289 ~ 23209518 (+)
G236330 NA non-coding downstream 26504 23234719 ~ 23234939 (+)
G236356 NA non-coding downstream 73197 23281412 ~ 23282267 (+)
G236359 NA non-coding downstream 89395 23297610 ~ 23297897 (+)
G236325 NA non-coding downstream 98640 23306855 ~ 23307684 (+)
G236301 NA other upstream 8933 23198852 ~ 23199075 (+)
G236271 LOC106581124 other upstream 27709 23144516 ~ 23191853 (+)
G235571 NA other upstream 509174 22672736 ~ 22698834 (+)
G235569 NA other upstream 527280 22673525 ~ 22685509 (+)
LOC110514034 NA other upstream 735091 22460524 ~ 22472917 (+)
G236370 LOC106581434 other downstream 138665 23346880 ~ 23349378 (+)
G236372 LOC106581434 other downstream 141876 23350091 ~ 23350815 (+)
LOC110514613 hormad1 other downstream 584582 23780400 ~ 23795199 (+)
LOC110514733 LOC106580799 other downstream 700535 23908750 ~ 23932207 (+)
G236753 NA other downstream 847104 24055319 ~ 24055667 (+)

Expression


Co-expression Network