Gene
RNA
| Item | Value |
|---|---|
| gene id | G236356 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 23281412 ~ 23282267 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU270130 | True | 768 | lncRNA | 0.55 | 2 | 23281412 | 23282267 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| smarcc1a | LOC106605342 | coding | upstream | 53844 | 23210418 ~ 23227568 (+) |
| LOC110514335 | LOC106581155 | coding | upstream | 148338 | 23119383 ~ 23133074 (+) |
| LOC110514282 | LOC106581183 | coding | upstream | 387636 | 22869740 ~ 22893776 (+) |
| LOC110514168 | LOC106581241 | coding | upstream | 663329 | 22612036 ~ 22618089 (+) |
| LOC110514114 | can7 | coding | upstream | 706302 | 22557122 ~ 22575110 (+) |
| elp6 | LOC106581052 | coding | downstream | 20505 | 23302772 ~ 23306081 (+) |
| LOC110514448 | LOC106581016 | coding | downstream | 23965 | 23306232 ~ 23342019 (+) |
| LOC110514472 | LOC106581037 | coding | downstream | 86737 | 23369004 ~ 23374440 (+) |
| LOC110514513 | LOC106580947 | coding | downstream | 395095 | 23677362 ~ 23696446 (+) |
| LOC110514526 | LOC106605333 | coding | downstream | 420398 | 23702665 ~ 23708816 (+) |
| G236330 | NA | non-coding | upstream | 46473 | 23234719 ~ 23234939 (+) |
| G236314 | NA | non-coding | upstream | 71894 | 23209289 ~ 23209518 (+) |
| G236312 | NA | non-coding | upstream | 73197 | 23208008 ~ 23208215 (+) |
| G236309 | NA | non-coding | upstream | 75665 | 23205516 ~ 23205747 (+) |
| G236302 | NA | non-coding | upstream | 81277 | 23199884 ~ 23200135 (+) |
| G236359 | NA | non-coding | downstream | 15343 | 23297610 ~ 23297897 (+) |
| G236325 | NA | non-coding | downstream | 24588 | 23306855 ~ 23307684 (+) |
| G236363 | LOC100194703 | non-coding | downstream | 28293 | 23310560 ~ 23310914 (+) |
| LOC110514561 | NA | non-coding | downstream | 431108 | 23713371 ~ 23718761 (+) |
| G236301 | NA | other | upstream | 82337 | 23198852 ~ 23199075 (+) |
| G236271 | LOC106581124 | other | upstream | 101113 | 23144516 ~ 23191853 (+) |
| G235571 | NA | other | upstream | 582578 | 22672736 ~ 22698834 (+) |
| G235569 | NA | other | upstream | 600684 | 22673525 ~ 22685509 (+) |
| LOC110514034 | NA | other | upstream | 808495 | 22460524 ~ 22472917 (+) |
| G236370 | LOC106581434 | other | downstream | 64613 | 23346880 ~ 23349378 (+) |
| G236372 | LOC106581434 | other | downstream | 67824 | 23350091 ~ 23350815 (+) |
| LOC110514613 | hormad1 | other | downstream | 510530 | 23780400 ~ 23795199 (+) |
| LOC110514733 | LOC106580799 | other | downstream | 626483 | 23908750 ~ 23932207 (+) |
| G236753 | NA | other | downstream | 773052 | 24055319 ~ 24055667 (+) |
