G236370 (LOC106581434)


Basic Information

Item Value
gene id G236370
gene name LOC106581434
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 23346880 ~ 23349378 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU270145
GCTCTGAGACCAGCATGACCACCAGCGAAACCTTCTGCTCCCACACCATGAGCCAGAAGTCGGCGGCCGTGCCCGACAGCGGCGCCTGCGTGGCGATGAGGCGCGGGCAGTAGGGCGACAGCTCCTCCACAAAGCTGCCGTTGATGTAGTCGTCCTTGCCAGAGCGCAGCAGGACGCGGTTACAGTCGTAGGGCATCACGTCCTGGTGACGGTTCTTCATGGTGTAGCAGCGGGCGATGGCGATGGACAGCTGCCTGGCGTCCCTCTCCTGCCCTTCCTGGAGCTCCTTCCAGCGGGCATCCAGCGGCGACAGGCCACCTTCGTCCACCGACGGGCGCTCCAGAGACTCCACGGCCGACCGGAAGCGTTCGAGTTCGCCGCAGAGGCGGGCTACGCGTTCGGGGGCTTGGTACGGGTCACCCTGGATCAGCCGGACGCCCTGGGAGCTCTTCTTGCGGCGCTCCCCGTCCTGAGGGTCAGCCTTGGTGGGTTGGAGGACGTTGGCGGGGGCTTTGGGGCCGCCGGGCTGGCTCTCTGGGCTGGAGGAGAGCAGGTCGTCTGTGATGGAGTTCTGGCGCgggaagagggaggtggagggggataaggaggaagggagagagggtggaccACCAGGGGTGGGGGCTGGGGAGGGCCTCTGAGGAGCCAGGCCTAGGGAAGAGGGGCccggggagggagaaggggaaggggagggCGAGGGAAGGATGACGTTAGGTGGGAGGGCCACTGGAGGAGCTCCAGCAGTTGGTGGAATCATGTGCTGGGGAGGGGGCCGAGGAGAGCCGTTCACACCTGGAGGAGTAGGGTACATGGTGGGGGTCATGGGGGCTACAGGCTGGGGAACCTGGGACTGTTGGGGGGCTGATTGAGGCATTATAGGAGGCTGGTAGCCCTGTGGTAACTGGGGCTGGTAGACATGTTGGGGGGGTTGACCAGGGTGGGGCATCTGGGGCCCCTGAGGTGGGAGGGGGCCCCTGGGCAGGTAAGCCTGAGGGAGGTGGACATGTTGGGGCTGGGAAGCAGGGGGCATGGGCTGGCTGGTGGGGGGCAGGTAAGCCTGGGAAACTGGGGGCATTGGCTGGCTGTTAGGGGGTATCTGCTGATGAGGGCCAGGGTGCATTTGTGGATGCGGGTGCATTTGCTGGGTGTTGGGATgcatttgttgttgttggggaGGTAGCATCTGCTGATGAGGGTGCAGGGGCATCTGTTGGTTGGCAGGTTGCATGTATGGTTGGGAGACAGGAGGCATGGGCTGGGAAGTGGTGGGCATCTGTGGGTGAGGGCCCCTTGGGATCATGTGTGGGGGCTGTTGGGGCAggtagccatgctggggtTGTGGCTGGGGCTGACCAGGATATGGCTGCTGATACTGGGGGGGCATGGGTGGCCGGGGCTGGTGCTGGGGGGGGATGTACTGTGGGTAACCCTGCTGTGCCTGGGGAGGGGGTCGGGGCCCGGGCATCGCCCTGGGGGCAGACTGGTAGCCAGGGGGCAGCTGCCCAGGAGGGTGTTGGTACTGATGCTGTGGATGTTGGTGTGGCACCTGGCTGGGCGCTTGCATGGGCACCCCAGGCTGGGTCATGTACTGTGGGTACATACCCATCTGTGGGGGAACAGCGTAGCCTGCAGAGACAGTAGGTGGTACAGGGTGGCGTGGGGCTGAGTTATAACTGGGGATGGGggtctggatactatctactgtagTAGTGGAGGGACGGAAATGGGCACAGGCAGGCCCGACTCCCCCAGCTTGGGGGGCTTGCGGCTGGGGAGGGCCATAGCCAGAAACAGGGGTCTGCTGGGGGGGTAGCTGAGTGAAGGGTCCGCGAGGGAAACGCTGGGCGGGGAGTGGGCCGGGGAACTGAGGCGGGCGATGGTTTGGTGGGAACTGAGGGGTATAGAGCGGTGCCCCAGGCGCCCCTGGCCAGGGTAATGAAGCATTGCCACCCAGGTTGGCACTAGGAAGGAAAGCCTCAGGTCCCGGGCGAATGGCAGAGTGCAGGGAGGGGTGGTCGGGGGGTATACTACGGAGCTCGTCAGGCAGGTCTCCTCCCAGGCTCAGTATAGCAGCGTTGATCTGGGCTAGCTCGGCATCCTCCAAACTAGAACAGGCAGAGTCCACGTCAGAGCCCCCCTTGGACCCCAGGGACGGTTTGGCTGCAGTGGGCCGAGAAGGGGGATTCTTCTGGGTCTCCCTGTCCAGCAcggccttcctctcctcctccctggccTGACACAGAGTCTTAGCTCTCTCCAGCAGGCGGGAGGACTTGGTCTCCAGGTCCTCATAGAACTCCTTCCCCTCCTGGGACTTCTTCATCAGGTCCTCGTAAGCCTCGTAGGACGCCACCAGGGTCTGCACCGTGC

Function

NR:

description
tyrosine-protein phosphatase non-receptor type 23-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU270145 True 2388 TUCP 0.37 4 23346880 23349378

Neighbor

gene id symbol gene type direction distance location
LOC110514448 LOC106581016 coding upstream 4861 23306232 ~ 23342019 (+)
elp6 LOC106581052 coding upstream 40799 23302772 ~ 23306081 (+)
LOC110514420 LOC106581064 coding upstream 55884 23236262 ~ 23290996 (+)
smarcc1a LOC106605342 coding upstream 119312 23210418 ~ 23227568 (+)
LOC110514335 LOC106581155 coding upstream 213806 23119383 ~ 23133074 (+)
LOC110514472 LOC106581037 coding downstream 19626 23369004 ~ 23374440 (+)
LOC110514513 LOC106580947 coding downstream 327984 23677362 ~ 23696446 (+)
LOC110514526 LOC106605333 coding downstream 353287 23702665 ~ 23708816 (+)
LOC110514561 NA coding downstream 363993 23713371 ~ 23718761 (+)
LOC110514613 hormad1 coding downstream 431022 23780400 ~ 23795199 (+)
G236363 LOC100194703 non-coding upstream 35966 23310560 ~ 23310914 (+)
G236325 NA non-coding upstream 39196 23306855 ~ 23307684 (+)
G236359 NA non-coding upstream 48983 23297610 ~ 23297897 (+)
G236356 NA non-coding upstream 64613 23281412 ~ 23282267 (+)
G236330 NA non-coding upstream 111941 23234719 ~ 23234939 (+)
G236615 NA non-coding downstream 399051 23748429 ~ 23748663 (+)
G236616 NA non-coding downstream 399892 23749270 ~ 23749506 (+)
G236622 NA non-coding downstream 409195 23758573 ~ 23759384 (+)
G236301 NA other upstream 147805 23198852 ~ 23199075 (+)
G236271 LOC106581124 other upstream 166581 23144516 ~ 23191853 (+)
G235571 NA other upstream 648046 22672736 ~ 22698834 (+)
G235569 NA other upstream 666152 22673525 ~ 22685509 (+)
LOC110514034 NA other upstream 873963 22460524 ~ 22472917 (+)
G236372 LOC106581434 other downstream 713 23350091 ~ 23350815 (+)
LOC110514733 LOC106580799 other downstream 559372 23908750 ~ 23932207 (+)
G236753 NA other downstream 705941 24055319 ~ 24055667 (+)
G238034 NA other downstream 1400027 24749405 ~ 24750383 (+)

Expression


Co-expression Network