Gene
RNA
| Item | Value |
|---|---|
| gene id | G236372 |
| gene name | LOC106581434 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 23350091 ~ 23350815 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: tyrosine-protein phosphatase non-receptor type 23-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU270150 | True | 636 | TUCP | 0.60 | 2 | 23350091 | 23350815 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110514448 | LOC106581016 | coding | upstream | 8072 | 23306232 ~ 23342019 (+) |
| elp6 | LOC106581052 | coding | upstream | 44010 | 23302772 ~ 23306081 (+) |
| LOC110514420 | LOC106581064 | coding | upstream | 59095 | 23236262 ~ 23290996 (+) |
| smarcc1a | LOC106605342 | coding | upstream | 122523 | 23210418 ~ 23227568 (+) |
| LOC110514335 | LOC106581155 | coding | upstream | 217017 | 23119383 ~ 23133074 (+) |
| LOC110514472 | LOC106581037 | coding | downstream | 18189 | 23369004 ~ 23374440 (+) |
| LOC110514513 | LOC106580947 | coding | downstream | 326547 | 23677362 ~ 23696446 (+) |
| LOC110514526 | LOC106605333 | coding | downstream | 351850 | 23702665 ~ 23708816 (+) |
| LOC110514561 | NA | coding | downstream | 362556 | 23713371 ~ 23718761 (+) |
| LOC110514613 | hormad1 | coding | downstream | 429585 | 23780400 ~ 23795199 (+) |
| G236363 | LOC100194703 | non-coding | upstream | 39177 | 23310560 ~ 23310914 (+) |
| G236325 | NA | non-coding | upstream | 42407 | 23306855 ~ 23307684 (+) |
| G236359 | NA | non-coding | upstream | 52194 | 23297610 ~ 23297897 (+) |
| G236356 | NA | non-coding | upstream | 67824 | 23281412 ~ 23282267 (+) |
| G236330 | NA | non-coding | upstream | 115152 | 23234719 ~ 23234939 (+) |
| G236615 | NA | non-coding | downstream | 397614 | 23748429 ~ 23748663 (+) |
| G236616 | NA | non-coding | downstream | 398455 | 23749270 ~ 23749506 (+) |
| G236622 | NA | non-coding | downstream | 407758 | 23758573 ~ 23759384 (+) |
| G236370 | LOC106581434 | other | upstream | 713 | 23346880 ~ 23349378 (+) |
| G236301 | NA | other | upstream | 151016 | 23198852 ~ 23199075 (+) |
| G236271 | LOC106581124 | other | upstream | 169792 | 23144516 ~ 23191853 (+) |
| G235571 | NA | other | upstream | 651257 | 22672736 ~ 22698834 (+) |
| G235569 | NA | other | upstream | 669363 | 22673525 ~ 22685509 (+) |
| LOC110514733 | LOC106580799 | other | downstream | 557935 | 23908750 ~ 23932207 (+) |
| G236753 | NA | other | downstream | 704504 | 24055319 ~ 24055667 (+) |
| G238034 | NA | other | downstream | 1398590 | 24749405 ~ 24750383 (+) |
| G238047 | NA | other | downstream | 1414851 | 24765666 ~ 24766363 (+) |
